iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tru-117700

Ensembl Protein ID

ENSTRUP00000002232.1

UniProt Accession

H2RQ18; H2RQ18_TAKRU

Protein Name

Eukaryotic translation initiation factor 3 subunit F; Eukaryotic translation initiation factor 3 subunit 5

Gene Name

eif3f; EIF3F; EIF3S5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000000940.1	ENSTRUT00000002242.1	ENSTRUP00000002232.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	79.18	3.00e-128	455.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Takifugu rubripes

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

LGGARGGAVE PFSNMSVYGP VVKIHPVVLS SICDSYERRN EGASRVIGTL LGTIDKHSIE 60
VTNCFSVPHN ESEDEVAVDM EFAKNMYELH KRVSPTEIIV GWYATGFDIT EHSVLIHEYY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAGGCGGCG CTCGAGGCGG CGCTGTGGAG CCCTTTTCCA ACATGTCGGT GTACGGACCT 60
GTCGTGAAAA TTCACCCAGT TGTTCTTTCT TCTATCTGCG ACTCTTACGA GCGCAGAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0003743--F:translation initiation factor activity
GO:0031369--F:translation initiation factor binding
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation
GO:0006413--P:translational initiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	36.21	3.00e-49	189.00
IUUC-Aml-001527	Ailuropoda melanoleuca	79.40	6.00e-129	453.00
IUUC-Atr-002686	Amborella trichopoda	44.11	2.00e-55	209.00
IUUC-Apl-003977	Anas platyrhynchos	78.12	2.00e-106	377.00
IUUC-Aca-004335	Anolis carolinensis	79.18	1.00e-129	455.00
IUUC-Aly-005945	Arabidopsis lyrata	39.92	4.00e-54	204.00
IUUC-Ath-007045	Arabidopsis thaliana	39.92	1.00e-52	199.00
IUUC-Acl-008365	Aspergillus clavatus	34.07	5.00e-42	164.00
IUUC-Afl-008742	Aspergillus flavus	35.40	2.00e-41	162.00
IUUC-Afu-009030	Aspergillus fumigatus	34.07	6.00e-42	164.00
IUUC-Ani-009212	Aspergillus nidulans	35.04	2.00e-42	166.00
IUUC-Ang-009712	Aspergillus niger	33.94	3.00e-41	162.00
IUUC-Aor-009885	Aspergillus oryzae	35.77	1.00e-44	173.00
IUUC-Ate-010315	Aspergillus terreus	33.89	1.00e-40	160.00
IUUC-Ame-010801	Astyanax mexicanus	55.44	7.00e-76	276.00
IUUC-Bgr-011982	Blumeria graminis	33.70	2.00e-41	162.00
IUUC-Bta-012804	Bos taurus	79.55	1.00e-129	456.00
IUUC-Bci-013891	Botrytis cinerea	33.70	8.00e-36	144.00
IUUC-Bdi-014328	Brachypodium distachyon	39.08	7.00e-53	200.00
IUUC-Bol-015446	Brassica oleracea	38.71	1.00e-53	202.00
IUUC-Bra-016862	Brassica rapa	39.07	3.00e-54	204.00
IUUC-Cel-018171	Caenorhabditis elegans	35.66	2.00e-45	175.00
IUUC-Cja-019335	Callithrix jacchus	79.18	2.00e-129	454.00
IUUC-Cfa-020138	Canis familiaris	79.03	2.00e-128	452.00
IUUC-Cpo-022109	Cavia porcellus	70.96	4.00e-111	394.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	42.54	4.00e-66	244.00
IUUC-Csa-023994	Chlorocebus sabaeus	79.18	3.00e-129	454.00
IUUC-Cho-024351	Choloepus hoffmanni	60.67	2.00e-88	318.00
IUUC-Cin-025801	Ciona intestinalis	53.14	2.00e-84	305.00
IUUC-Csv-025805	Ciona savignyi	52.24	7.00e-82	296.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	30.55	6.00e-35	141.00
IUUC-Cne-026868	Cryptococcus neoformans	30.55	3.00e-30	125.00
IUUC-Cme-027328	Cyanidioschyzon merolae	28.93	2.00e-23	103.00
IUUC-Dre-028085	Danio rerio	85.51	1.00e-143	501.00
IUUC-Dno-030099	Dasypus novemcinctus	79.03	1.00e-128	452.00
IUUC-Dor-030324	Dipodomys ordii	71.32	9.00e-111	393.00
IUUC-Dse-031314	Dothistroma septosporum	35.77	2.00e-45	176.00
IUUC-Dme-031926	Drosophila melanogaster	48.38	2.00e-79	288.00
IUUC-Ete-032569	Echinops telfairi	73.23	5.00e-117	413.00
IUUC-Eca-033502	Equus caballus	76.78	1.00e-121	429.00
IUUC-Eeu-034883	Erinaceus europaeus	62.16	3.00e-60	224.00
IUUC-Fca-035873	Felis catus	79.40	5.00e-129	453.00
IUUC-Fal-036921	Ficedula albicollis	78.81	4.00e-130	457.00
IUUC-Fox-037765	Fusarium oxysporum	32.01	7.00e-31	127.00
IUUC-Fso-038240	Fusarium solani	32.73	2.00e-33	135.00
IUUC-Gmo-038864	Gadus morhua	89.38	4.00e-149	520.00
IUUC-Ggr-039862	Gaeumannomyces graminis	31.12	8.00e-32	130.00
IUUC-Gga-040952	Gallus gallus	78.81	1.00e-129	455.00
IUUC-Gac-041677	Gasterosteus aculeatus	89.49	9.00e-151	525.00
IUUC-Gma-043061	Glycine max	41.13	8.00e-53	200.00
IUUC-Ggo-045591	Gorilla gorilla	79.18	1.00e-129	455.00
IUUC-Hsa-046860	Homo sapiens	79.18	3.00e-129	454.00
IUUC-Hvu-047410	Hordeum vulgare	31.51	3.00e-22	97.40
IUUC-Itr-048211	Ictidomys tridecemlineatus	79.03	1.00e-128	452.00
IUUC-Lch-049410	Latimeria chalumnae	70.00	8.00e-84	302.00
IUUC-Lpe-051102	Leersia perrieri	40.78	1.00e-51	196.00
IUUC-Loc-052016	Lepisosteus oculatus	76.62	2.00e-124	438.00
IUUC-Lma-053157	Leptosphaeria maculans	34.25	8.00e-46	177.00
IUUC-Laf-054568	Loxodonta africana	78.81	6.00e-129	453.00
IUUC-Mcc-054613	Macaca mulatta	79.18	2.00e-129	455.00
IUUC-Meu-056832	Macropus eugenii	58.57	1.00e-66	245.00
IUUC-Mor-057104	Magnaporthe oryzae	30.24	2.00e-31	129.00
IUUC-Mtr-058445	Medicago truncatula	41.83	3.00e-63	234.00
IUUC-Mla-059038	Melampsora laricipopulina	31.38	6.00e-33	134.00
IUUC-Mga-059548	Meleagris gallopavo	78.81	6.00e-114	402.00
IUUC-Mvi-060520	Microbotryum violaceum	28.33	1.00e-23	103.00
IUUC-Mdo-062376	Monodelphis domestica	79.03	4.00e-129	454.00
IUUC-Mmu-063254	Mus musculus	79.03	3.00e-128	451.00
IUUC-Mac-065635	Musa acuminata	40.71	4.00e-56	211.00
IUUC-Mpu-066314	Mustela putorius furo	79.40	5.00e-129	453.00
IUUC-Mlu-067512	Myotis lucifugus	79.78	3.00e-129	454.00
IUUC-Nfi-068262	Neosartorya fischeri	34.07	6.00e-42	164.00
IUUC-Ncr-068872	Neurospora crassa	31.64	2.00e-32	133.00
IUUC-Nle-070118	Nomascus leucogenys	79.40	5.00e-129	454.00
IUUC-Opr-071228	Ochotona princeps	79.15	8.00e-113	399.00
IUUC-Ont-072600	Oreochromis niloticus	91.82	4.00e-151	526.00
IUUC-Oan-073584	Ornithorhynchus anatinus	78.39	4.00e-114	403.00
IUUC-Ocu-074542	Oryctolagus cuniculus	79.40	2.00e-129	454.00
IUUC-Oba-075923	Oryza barthii	40.30	3.00e-53	201.00
IUUC-Obr-076313	Oryza brachyantha	40.78	1.00e-52	199.00
IUUC-Ogl-076932	Oryza glaberrima	40.30	3.00e-53	201.00
IUUC-Ogu-078152	Oryza glumaepatula	40.30	3.00e-53	201.00
IUUC-Oin-079528	Oryza indica	40.30	3.00e-53	201.00
IUUC-Olo-080401	Oryza longistaminata	40.30	3.00e-53	201.00
IUUC-Ome-081553	Oryza meridionalis	39.92	8.00e-53	200.00
IUUC-Oni-082090	Oryza nivara	40.30	3.00e-53	201.00
IUUC-Opu-083583	Oryza punctata	40.78	2.00e-52	198.00
IUUC-Oru-084492	Oryza rufipogon	40.30	3.00e-53	201.00
IUUC-Osa-085383	Oryza sativa	40.30	3.00e-53	201.00
IUUC-Ola-086835	Oryzias latipes	89.44	2.00e-154	537.00
IUUC-Olu-087716	Ostreococcus lucimarinus	29.06	1.00e-30	126.00
IUUC-Oga-088886	Otolemur garnettii	79.78	7.00e-130	456.00
IUUC-Oar-090079	Ovis aries	79.55	1.00e-129	455.00
IUUC-Ptr-091457	Pan troglodytes	79.18	3.00e-129	454.00
IUUC-Pan-092317	Papio anubis	76.76	5.00e-82	296.00
IUUC-Psi-093129	Pelodiscus sinensis	75.29	5.00e-117	413.00
IUUC-Pma-094488	Petromyzon marinus	73.05	5.00e-127	446.00
IUUC-Pno-095049	Phaeosphaeria nodorum	35.16	1.00e-45	176.00
IUUC-Ppa-095341	Physcomitrella patens	43.45	2.00e-68	251.00
IUUC-Pfo-096286	Poecilia formosa	90.51	3.00e-151	527.00
IUUC-Pab-097765	Pongo abelii	79.18	3.00e-129	454.00
IUUC-Pop-099131	Populus trichocarpa	41.44	2.00e-58	219.00
IUUC-Pca-100524	Procavia capensis	65.81	3.00e-85	307.00
IUUC-Ppe-101934	Prunus persica	41.44	1.00e-62	233.00
IUUC-Pva-102577	Pteropus vampyrus	80.15	4.00e-130	457.00
IUUC-Pgr-103521	Puccinia graminis	30.29	2.00e-33	136.00
IUUC-Pte-104304	Pyrenophora teres	34.25	2.00e-45	176.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	34.25	1.00e-45	176.00
IUUC-Rno-105717	Rattus norvegicus	79.03	2.00e-128	451.00
IUUC-Sha-107190	Sarcophilus harrisii	79.69	1.00e-126	446.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	35.00	7.00e-46	177.00
IUUC-Spo-108355	Schizosaccharomyces pombe	36.52	2.00e-46	179.00
IUUC-Smo-109374	Selaginella moellendorffii	45.56	3.00e-71	261.00
IUUC-Sit-110119	Setaria italica	40.30	3.00e-53	201.00
IUUC-Sly-111570	Solanum lycopersicum	38.59	3.00e-51	194.00
IUUC-Stu-112308	Solanum tuberosum	40.51	1.00e-57	216.00
IUUC-Sar-113515	Sorex araneus	74.47	1.00e-38	152.00
IUUC-Sbi-114605	Sorghum bicolor	39.92	4.00e-53	202.00
IUUC-Sre-114906	Sporisorium reilianum	41.97	2.00e-57	215.00
IUUC-Tgu-117087	Taeniopygia guttata	77.54	2.00e-111	394.00
IUUC-Tni-120470	Tetraodon nigroviridis	95.24	2.00e-155	540.00
IUUC-Tca-121109	Theobroma cacao	40.30	3.00e-51	194.00
IUUC-Tre-122095	Trichoderma reesei	33.94	1.00e-33	137.00
IUUC-Tvi-122580	Trichoderma virens	33.57	5.00e-33	134.00
IUUC-Tae-125129	Triticum aestivum	39.54	7.00e-54	203.00
IUUC-Tur-126658	Triticum urartu	33.93	1.00e-44	173.00
IUUC-Tme-127043	Tuber melanosporum	37.13	9.00e-48	183.00
IUUC-Tbe-127927	Tupaia belangeri	79.40	5.00e-129	453.00
IUUC-Ttr-129231	Tursiops truncatus	79.78	2.00e-129	455.00
IUUC-Uma-129578	Ustilago maydis	40.88	3.00e-55	208.00
IUUC-Vda-129730	Verticillium dahliae	32.25	1.00e-38	153.00
IUUC-Vpa-130677	Vicugna pacos	48.15	1.00e-27	117.00
IUUC-Vvi-130968	Vitis vinifera	42.21	9.00e-59	220.00
IUUC-Xtr-132203	Xenopus tropicalis	78.15	2.00e-128	451.00
IUUC-Xma-133972	Xiphophorus maculatus	89.74	3.00e-150	523.00
IUUC-Yli-134553	Yarrowia lipolytica	35.77	6.00e-43	167.00
IUUC-Zma-134941	Zea mays	41.13	4.00e-49	187.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence