iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ome-081716

Ensembl Protein ID

OMERI07G09800.4

UniProt Accession

A0A0E0EAK9; A0A0E0EAK9_9ORYZ

Protein Name

Ribosome biogenesis protein BOP1 homolog

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OMERI07G09800	OMERI07G09800.1	OMERI07G09800.1
OMERI07G09800	OMERI07G09800.2	OMERI07G09800.2
OMERI07G09800	OMERI07G09800.4	OMERI07G09800.4
OMERI07G09800	OMERI07G09800.6	OMERI07G09800.6

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.90e-11	42.9	343	381

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+++v +l+   ++  ++sGs Dgti+vW++ tg+++k
   Q: 343  GHNGPVKSLSVeaTGQWIASGSSDGTIRVWEVETGRCIK 381
           8*********9976699********************87 PP

Organism

Oryza meridionalis

Functional Description
(View)

Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit.

Protein Sequence
(Fasta)

MGRSDGDHGS DLSADDSPWS EGSWSDDDDE GSLSFEDSGE GSDAESDEPD APAVEESDSS 60
EDEVAPRNTI GDVPLEWYKN EEHIGYDITG SKIKKRDREG RIEAYLRNAD DAKNWRKIYD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCGACCCAA TTCGACCGCA CTCCCGGCCG GCGGCGCGCA CTCTCCCTCT CTCCCCCTAC 60
TCCGCCGCGC TGGTGGCGCC GCCTTCGCCC TCCGGCTGCC GCCTCGACCC CAACTGCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0539--Nucleus
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	77.56	0.00e+00	862.00
IUUC-Aml-001507	Ailuropoda melanoleuca	37.60	1.00e-112	399.00
IUUC-Atr-003141	Amborella trichopoda	64.44	1.00e-152	532.00
IUUC-Apl-003545	Anas platyrhynchos	39.73	4.00e-76	278.00
IUUC-Aly-005730	Arabidopsis lyrata	48.12	3.00e-158	551.00
IUUC-Ath-007625	Arabidopsis thaliana	59.06	2.00e-146	512.00
IUUC-Ago-007958	Ashbya gossypii	39.95	1.00e-76	280.00
IUUC-Acl-008344	Aspergillus clavatus	44.17	3.00e-66	245.00
IUUC-Afl-008616	Aspergillus flavus	41.37	3.00e-68	252.00
IUUC-Afu-009083	Aspergillus fumigatus	43.56	8.00e-63	234.00
IUUC-Ani-009365	Aspergillus nidulans	40.69	1.00e-69	257.00
IUUC-Ang-009796	Aspergillus niger	40.37	5.00e-64	238.00
IUUC-Aor-010015	Aspergillus oryzae	41.37	3.00e-68	252.00
IUUC-Ate-010537	Aspergillus terreus	38.01	2.00e-70	259.00
IUUC-Ame-011767	Astyanax mexicanus	55.56	2.00e-46	178.00
IUUC-Bgr-012286	Blumeria graminis	37.95	2.00e-72	266.00
IUUC-Bta-013569	Bos taurus	38.83	6.00e-119	421.00
IUUC-Bci-013820	Botrytis cinerea	38.29	7.00e-64	238.00
IUUC-Bdi-014895	Brachypodium distachyon	69.12	0.00e+00	809.00
IUUC-Bol-016405	Brassica oleracea	53.76	0.00e+00	644.00
IUUC-Bra-016688	Brassica rapa	53.92	0.00e+00	645.00
IUUC-Cel-018201	Caenorhabditis elegans	34.92	4.00e-95	341.00
IUUC-Cja-019009	Callithrix jacchus	41.35	5.00e-129	454.00
IUUC-Cfa-020173	Canis familiaris	36.25	4.00e-110	391.00
IUUC-Cpo-021796	Cavia porcellus	39.31	1.00e-117	416.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	50.53	3.00e-105	375.00
IUUC-Csa-023440	Chlorocebus sabaeus	38.25	2.00e-122	432.00
IUUC-Cin-025782	Ciona intestinalis	42.64	2.00e-86	312.00
IUUC-Csv-026352	Ciona savignyi	43.01	4.00e-87	315.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	34.83	3.00e-88	318.00
IUUC-Cne-027004	Cryptococcus neoformans	43.65	3.00e-84	305.00
IUUC-Cme-027242	Cyanidioschyzon merolae	28.19	4.00e-47	182.00
IUUC-Dre-028658	Danio rerio	37.90	8.00e-120	424.00
IUUC-Dno-028883	Dasypus novemcinctus	41.49	1.00e-131	463.00
IUUC-Dor-031031	Dipodomys ordii	37.44	9.00e-119	420.00
IUUC-Dse-031443	Dothistroma septosporum	39.02	2.00e-65	242.00
IUUC-Dme-031786	Drosophila melanogaster	32.94	9.00e-85	307.00
IUUC-Eca-033677	Equus caballus	39.06	5.00e-119	421.00
IUUC-Eeu-035310	Erinaceus europaeus	44.57	4.00e-92	331.00
IUUC-Fca-035888	Felis catus	36.57	3.00e-112	398.00
IUUC-Fal-037438	Ficedula albicollis	47.25	3.00e-66	245.00
IUUC-Fox-037973	Fusarium oxysporum	35.42	2.00e-75	276.00
IUUC-Fso-038187	Fusarium solani	34.13	7.00e-74	271.00
IUUC-Gmo-039114	Gadus morhua	41.19	5.00e-73	268.00
IUUC-Ggr-039746	Gaeumannomyces graminis	34.51	1.00e-79	290.00
IUUC-Gga-040631	Gallus gallus	56.34	5.00e-46	177.00
IUUC-Gac-042582	Gasterosteus aculeatus	38.69	4.00e-108	384.00
IUUC-Gma-044215	Glycine max	57.36	0.00e+00	727.00
IUUC-Ggo-045587	Gorilla gorilla	38.25	9.00e-122	429.00
IUUC-Hsa-046319	Homo sapiens	38.25	7.00e-122	430.00
IUUC-Hvu-047526	Hordeum vulgare	64.36	0.00e+00	775.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	40.95	6.00e-129	454.00
IUUC-Kpa-049221	Komagataella pastoris	39.20	1.00e-71	264.00
IUUC-Lch-049640	Latimeria chalumnae	39.04	2.00e-127	449.00
IUUC-Lpe-051135	Leersia perrieri	88.77	0.00e+00	1003.00
IUUC-Loc-051930	Lepisosteus oculatus	44.84	2.00e-92	332.00
IUUC-Lma-053290	Leptosphaeria maculans	41.71	4.00e-65	242.00
IUUC-Laf-053903	Loxodonta africana	43.82	6.00e-82	297.00
IUUC-Mcc-055471	Macaca mulatta	38.41	4.00e-123	434.00
IUUC-Meu-056190	Macropus eugenii	39.32	5.00e-118	417.00
IUUC-Mor-057135	Magnaporthe oryzae	34.16	2.00e-72	266.00
IUUC-Mpo-057475	Magnaporthe poae	34.00	3.00e-71	262.00
IUUC-Mtr-058689	Medicago truncatula	63.02	3.00e-144	504.00
IUUC-Mla-059149	Melampsora laricipopulina	42.71	1.00e-79	290.00
IUUC-Mga-059645	Meleagris gallopavo	52.11	3.00e-17	81.30
IUUC-Mvi-060485	Microbotryum violaceum	35.87	8.00e-100	358.00
IUUC-Mmr-061674	Microcebus murinus	38.34	4.00e-112	397.00
IUUC-Mdo-062973	Monodelphis domestica	34.04	3.00e-90	325.00
IUUC-Mmu-064180	Mus musculus	37.37	7.00e-119	420.00
IUUC-Mac-064535	Musa acuminata	67.78	2.00e-179	621.00
IUUC-Mpu-066406	Mustela putorius furo	40.36	1.00e-130	459.00
IUUC-Mlu-067795	Myotis lucifugus	38.50	5.00e-111	394.00
IUUC-Nfi-068516	Neosartorya fischeri	39.85	7.00e-57	214.00
IUUC-Ncr-068767	Neurospora crassa	40.64	2.00e-65	243.00
IUUC-Opr-071084	Ochotona princeps	45.23	5.00e-63	234.00
IUUC-Ont-071614	Oreochromis niloticus	33.82	2.00e-86	312.00
IUUC-Oba-075980	Oryza barthii	92.25	0.00e+00	1067.00
IUUC-Obr-076799	Oryza brachyantha	76.37	0.00e+00	929.00
IUUC-Ogl-077134	Oryza glaberrima	79.17	0.00e+00	919.00
IUUC-Ogu-078655	Oryza glumaepatula	91.85	0.00e+00	1078.00
IUUC-Oin-079654	Oryza indica	79.17	0.00e+00	888.00
IUUC-Olo-080706	Oryza longistaminata	92.87	0.00e+00	1076.00
IUUC-Oni-082508	Oryza nivara	88.47	0.00e+00	1055.00
IUUC-Opu-083707	Oryza punctata	91.78	0.00e+00	1050.00
IUUC-Oru-084453	Oryza rufipogon	92.87	0.00e+00	1076.00
IUUC-Osa-085811	Oryza sativa	79.17	0.00e+00	919.00
IUUC-Ola-087361	Oryzias latipes	37.75	6.00e-87	314.00
IUUC-Oga-088015	Otolemur garnettii	38.99	5.00e-122	431.00
IUUC-Oar-090058	Ovis aries	43.38	7.00e-71	260.00
IUUC-Ptr-090631	Pan troglodytes	42.35	7.00e-55	206.00
IUUC-Pan-092306	Papio anubis	38.19	2.00e-122	432.00
IUUC-Pma-094622	Petromyzon marinus	38.42	4.00e-117	414.00
IUUC-Pno-094794	Phaeosphaeria nodorum	34.19	5.00e-54	205.00
IUUC-Ppa-095528	Physcomitrella patens	54.75	2.00e-145	508.00
IUUC-Pfo-096682	Poecilia formosa	34.49	6.00e-102	364.00
IUUC-Pab-097939	Pongo abelii	38.01	3.00e-109	388.00
IUUC-Pop-099530	Populus trichocarpa	52.70	8.00e-159	552.00
IUUC-Pca-100333	Procavia capensis	38.50	3.00e-118	418.00
IUUC-Ppe-102078	Prunus persica	60.23	1.00e-146	512.00
IUUC-Pgr-103525	Puccinia graminis	44.59	1.00e-72	267.00
IUUC-Ptt-103929	Puccinia triticina	44.32	2.00e-72	266.00
IUUC-Pte-104029	Pyrenophora teres	41.55	3.00e-76	278.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	41.55	7.00e-76	278.00
IUUC-Rno-105248	Rattus norvegicus	39.31	2.00e-119	422.00
IUUC-Sce-106381	Saccharomyces cerevisiae	38.42	2.00e-75	276.00
IUUC-Sha-106519	Sarcophilus harrisii	42.23	1.00e-135	476.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	39.67	1.00e-67	250.00
IUUC-Spo-108071	Schizosaccharomyces pombe	37.56	8.00e-65	241.00
IUUC-Smo-108881	Selaginella moellendorffii	56.81	0.00e+00	667.00
IUUC-Sit-110551	Setaria italica	68.63	0.00e+00	805.00
IUUC-Sly-110970	Solanum lycopersicum	72.59	1.00e-149	522.00
IUUC-Stu-112593	Solanum tuberosum	54.49	0.00e+00	640.00
IUUC-Sar-113123	Sorex araneus	51.41	4.00e-43	167.00
IUUC-Sbi-113945	Sorghum bicolor	68.57	0.00e+00	801.00
IUUC-Sre-115188	Sporisorium reilianum	43.09	6.00e-78	285.00
IUUC-Ssc-115352	Sus scrofa	35.27	1.00e-92	333.00
IUUC-Tru-117685	Takifugu rubripes	34.54	4.00e-87	315.00
IUUC-Tni-119982	Tetraodon nigroviridis	44.94	2.00e-83	302.00
IUUC-Tca-121664	Theobroma cacao	56.55	0.00e+00	682.00
IUUC-Tre-122229	Trichoderma reesei	39.80	1.00e-59	224.00
IUUC-Tvi-122576	Trichoderma virens	35.51	6.00e-63	234.00
IUUC-Tae-124110	Triticum aestivum	66.12	0.00e+00	728.00
IUUC-Tur-126781	Triticum urartu	77.92	0.00e+00	848.00
IUUC-Tme-127080	Tuber melanosporum	41.13	4.00e-86	311.00
IUUC-Ttr-128514	Tursiops truncatus	44.57	2.00e-86	313.00
IUUC-Uma-129556	Ustilago maydis	43.09	9.00e-76	277.00
IUUC-Vda-129715	Verticillium dahliae	39.73	1.00e-74	273.00
IUUC-Vvi-131211	Vitis vinifera	54.29	0.00e+00	644.00
IUUC-Xma-133883	Xiphophorus maculatus	32.24	1.00e-83	303.00
IUUC-Yli-134438	Yarrowia lipolytica	39.13	7.00e-70	258.00
IUUC-Zma-135341	Zea mays	82.98	0.00e+00	716.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence