iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-018005

Ensembl Protein ID

Bra000550.1-P

UniProt Accession

M4C8M2; M4C8M2_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra000550	Bra000550.1	Bra000550.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.60e-08	33.8	408	439

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH  ++tclaf  + + lvs++ Dg++ vW++
   Q: 408  GHDQRITCLAFsCCfNVLVSSGADGKLCVWST 439
           89*********765899*************95 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGDSTMILDE TNRKNLIFLI LQFLHEEGYE KSLHLIPEKT GSVDKALVRA SLCVDLRKLA 60
ESNPSLCVKL VFPNLNKSAL LSLVSLICPN SNVRMGGSKE DLIRLILQFL HEAKYKNTLH 120

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Nucleotide Sequence
(Fasta)

ATGGGTGATT CAACGATGAT TTTAGACGAG ACGAATCGAA AGAATCTCAT CTTCCTCATC 60
TTACAGTTCC TTCACGAAGA GGGCTATGAG AAAAGCTTAC ACTTGTACGG TCTCCCTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006018	Arabidopsis lyrata	69.19	0.00e+00	835.00
IUUC-Ath-006606	Arabidopsis thaliana	66.93	0.00e+00	810.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence