iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl++f  +++++ +p C H+fha+C+  w       s + +CP+Cr
   Q: 120  CAICLCEFedEEPLRWMPpCSHTFHANCIDEW------LSSRSTCPVCR 162
           ********54444777777*************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MTIFTRDFSH RILACVLLPL FLFQCLPYVT CQQGSESAGR NGKSKESSII GIVLLSLFLL 60
LLVVYCLNYG CCIEENETGG HEVLHSRVRR GIDKDVIESF PAFLYSEVKA FKIGNGGVEC 120

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Nucleotide Sequence
(Fasta)

TATCTCGCTT GCGCTAAACG GAGACATGGA GCTCAAGTGA TCGACCATTA TATAGCAGAA 60
GAACCGTTAA TATCATGACT ATCTTCACAA GAGATTTCAG CCATCGGATC CTAGCATGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0732--Signal
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT4G09130

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005567	Arabidopsis lyrata	83.10	1.00e-159	555.00
IUUC-Bol-015866	Brassica oleracea	67.13	2.00e-116	411.00
IUUC-Bra-016969	Brassica rapa	68.54	1.00e-120	425.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence