iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017613

Ensembl Protein ID

Bra000788.1-P

UniProt Accession

M4C9A9; M4C9A9_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra000788	Bra000788.1	Bra000788.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.90e-37	125.3	562	598
UBD/Beta-Prp	1.80e-67	228.6	618	902

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           gH ++v+++af  s+  +++Gs DgtikvWD+ +gvl
   Q: 562  GHLGWVRSVAFepSNEWFCTGSADGTIKVWDVASGVL 598
           8***********54499****************9997 PP

UBD/Beta-Prp

   S: 21   dksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsg.dklvsGshd 115
           d+s+++++++d+ +k wd+++ k++rs+ gh ++v+++ ++p+ ++l+tg++D + +vwd++t ++  +l+gh+++v+s+   p+    +v+Gshd
   Q: 618  DTSYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKTQSFALSGHDKDVCSVFTPPTHpPQVVTGSHD 713
           789*********************************************************************************888********* PP
   S: 116  rtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl.ktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq 210
           +ti+ wdl+ g  +  tl++h+++v+ +++hp++n  vs+s+D++ + ++l + g+  + + +++   ++ ++++++g  +v+g+++g++ +wd +
   Q: 714  STIKFWDLRYGRTMT-TLTNHKKAVRATALHPTKNASVSASADNIKK-FSLnPKGEFRHNMLSQQRATINAVAVNEDG-VMVTGGDNGSLWFWDWK 806
           **************9.***************************9777.6665999999999999************98.99*************** PP
   S: 211  tgec..............................................vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktl 260
           +g+                                               +++ +g+td +  +++sp+++  + g+ D++ r+W++  +   ++l
   Q: 807  SGHSfqqaqaivqpgsleneagiyaacydqtgsrlnypdpaqldfgsisrMQQAEGYTDRFMFLAVSPEGKTNANGAGDETFRFWNVFRSMKAQAL 902
           9998888889999999999999999999999999999999999999999999999999***************************97555444444 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSKKNLAILL RARMRSSNHS AKSSLSQFTK EIPSNPQENH SGDHIVRNSS ELDTIGRVYD 60
VVRETMHSAI SATKTGGSDI TLNDFEEGYF SLSLEDRGKL LLALAKEYDV NREQVRELIK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCAAGA AAAACCTGGC GATTCTGTTG CGCGCTAGGA TGAGATCGTC TAACCATTCC 60
GCCAAATCGT CCCTTTCTCA GTTTACTGTA AGCCCTTTCT TCCAAAACAT CCAACCAAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR007956--Malonyl_CoA_deC
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF05292--MCD
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0050080--F:malonyl-CoA decarboxylase activity
GO:0006633--P:fatty acid biosynthetic process

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence