iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014591

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000884

Gene Name

LOC100842304; BRADI_5g19960

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI5G19960	BRADI5G19960.1	BRADI5G19960.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-07	32.8	162	204

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl +f dg  +++lp C H+fh++C+  w       + + +CPlCr
   Q: 162  CSVCLGEFHDGesLRLLPkCSHAFHQQCIDTW------LKSHSNCPLCR 204
           ********6655599999**************......**********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MASSPPGIIG AQPTWVPYEP TRDCSQGLCS TYCPQWCYFI FPPPPPFDLA GPSPDDSSGH 60
VFSPLVIAII GVLASAFLLV SYYTFISKYC GTFSSLRGRI FGSSSSSAAR NAGGGGGSGQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTCTT CGCCTCCTGG AATTATTGGG GCACAGCCCA CCTGGGTCCC CTACGAGCCA 60
ACCAGAGACT GCTCCCAGGG GCTGTGCAGC ACGTACTGCC CCCAGTGGTG CTACTTCATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100835994

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006095	Arabidopsis lyrata	52.23	3.00e-41	161.00
IUUC-Bol-016002	Brassica oleracea	53.05	2.00e-41	162.00
IUUC-Bra-017763	Brassica rapa	43.77	1.00e-41	162.00
IUUC-Gac-041340	Gasterosteus aculeatus	46.67	4.00e-13	68.60
IUUC-Lpe-051375	Leersia perrieri	73.61	1.00e-122	432.00
IUUC-Mac-065580	Musa acuminata	48.23	5.00e-79	287.00
IUUC-Oba-075508	Oryza barthii	74.09	3.00e-135	473.00
IUUC-Obr-076311	Oryza brachyantha	73.71	6.00e-129	452.00
IUUC-Ogl-077079	Oryza glaberrima	73.45	3.00e-135	473.00
IUUC-Ogu-078315	Oryza glumaepatula	73.71	1.00e-135	474.00
IUUC-Oin-079821	Oryza indica	73.45	4.00e-135	473.00
IUUC-Olo-080552	Oryza longistaminata	69.43	3.00e-131	460.00
IUUC-Oni-082586	Oryza nivara	72.05	5.00e-132	462.00
IUUC-Opu-083498	Oryza punctata	71.83	7.00e-133	466.00
IUUC-Oru-084696	Oryza rufipogon	73.71	4.00e-136	476.00
IUUC-Osa-086259	Oryza sativa	73.71	4.00e-136	476.00
IUUC-Pop-099671	Populus trichocarpa	40.51	7.00e-61	226.00
IUUC-Ptt-103733	Puccinia triticina	37.50	1.00e-10	59.70
IUUC-Sit-109802	Setaria italica	70.93	1.00e-112	399.00
IUUC-Sly-110835	Solanum lycopersicum	55.83	6.00e-52	197.00
IUUC-Stu-112220	Solanum tuberosum	57.28	7.00e-55	206.00
IUUC-Sbi-114294	Sorghum bicolor	69.10	1.00e-117	415.00
IUUC-Tca-121189	Theobroma cacao	42.05	1.00e-62	233.00
IUUC-Tae-124052	Triticum aestivum	73.82	2.00e-118	418.00
IUUC-Tur-126697	Triticum urartu	70.71	3.00e-87	313.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence