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Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Ath-007181
UUCD1 version UUC-ArT-00723
Ensembl Protein ID AT3G12920.1
UniProt Accession Q9LDD1; Q8L903; BRG3_ARATH
Genbank Protein ID BAB02499.1; AEE75262.1; BAC43062.1; AAP12885.1; AAM67026.1
Protein Name Probable BOI-related E3 ubiquitin-protein ligase 3; RING-type E3 ubiquitin transferase BRG3
Genbank Nucleotide ID AB026645; CP002686; AK118454; BT006236; AY088707
Gene Name BRG3; At3g12920; MGH6.3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G12920 AT3G12920.1 AT3G12920.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
Mentha
Protein Expression/Proteomics
Status Reviewed
Details
Family Domain References (PMIDs)
E3 activity/RING/RING RING 20921156
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description



     Probable E3 ubiquitin-protein ligase. Has no effect on the stability of the DELLA proteins.
Probable E3 ubiquitin-protein ligase. Has no effect on the stability of the DELLA proteins.
Protein Sequence
(Fasta)
MAVEAHHLNP LFSSNREMIH PVEASGVVYN TQMRYGTVPT FNPTVECQTS LFNPIYNISP 60
VDRLVHQSMK PTIQSVDSSL TFNSDNNVDF LRPVSSRKRS REESVVLNPS AYMQIQKNPT 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-007181|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AAATAAATAA AATAAAACAT CACATCTTCC TCTCTGTTCT CTATAAATTG GCAGACAAGA 60
GTGTGTTGGG TTCTGCTTTG ATATTTGTTT TTTAGTTTCT CCTTCTCTCT GCAGAAACCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-007181|E3,RING|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0611--Plant defense
KW-1185--Reference proteome
KW-0808--Transferase
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001370--BIR_rpt
IPR017066--E3ligase_BOI
IPR001841--Znf_RING

PROSITE

PS50089--ZF_RING_2

Gene Ontology

GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0006952--P:defense response
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0031347--P:regulation of defense response
GO:0043067--P:regulation of programmed cell death

KEGG ath:AT3G12920
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000461 Aegilops tauschii 44.80 1.00e-25 109.00
IUUC-Atr-002840 Amborella trichopoda 34.22 8.00e-41 159.00
IUUC-Aly-005596 Arabidopsis lyrata 94.33 5.00e-172 596.00
IUUC-Bdi-014485 Brachypodium distachyon 34.15 8.00e-23 100.00
IUUC-Bol-016115 Brassica oleracea 76.23 4.00e-148 516.00
IUUC-Bra-016625 Brassica rapa 73.64 2.00e-141 494.00
IUUC-Cfa-020660 Canis familiaris 33.73 2.00e-07 50.10
IUUC-Csv-025999 Ciona savignyi 46.67 1.00e-04 38.90
IUUC-Gma-043213 Glycine max 45.92 5.00e-46 177.00
IUUC-Hvu-047294 Hordeum vulgare 33.33 4.00e-27 114.00
IUUC-Mtr-058197 Medicago truncatula 42.18 4.00e-58 218.00
IUUC-Mga-059395 Meleagris gallopavo 35.21 9.00e-08 50.10
IUUC-Mac-065489 Musa acuminata 43.36 3.00e-64 237.00
IUUC-Obr-076027 Oryza brachyantha 39.62 2.00e-31 128.00
IUUC-Ogu-078972 Oryza glumaepatula 42.07 2.00e-27 115.00
IUUC-Pop-099748 Populus trichocarpa 52.38 6.00e-70 256.00
IUUC-Ppe-101568 Prunus persica 47.68 3.00e-74 271.00
IUUC-Sit-110637 Setaria italica 42.62 7.00e-33 133.00
IUUC-Sly-111823 Solanum lycopersicum 39.08 3.00e-51 194.00
IUUC-Stu-112335 Solanum tuberosum 42.90 3.00e-64 238.00
IUUC-Sbi-114703 Sorghum bicolor 40.41 2.00e-24 105.00
IUUC-Tca-121003 Theobroma cacao 47.85 2.00e-75 275.00
IUUC-Vvi-131641 Vitis vinifera 43.93 2.00e-52 198.00
Created Date 25-Jun-2017

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