iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017346

Ensembl Protein ID

Bra001616.1-P

UniProt Accession

M4CBN6; M4CBN6_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra001616	Bra001616.1	Bra001616.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.80e-20	72.1	153	193

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sd.tllvsGsdDgtikvWDlrtgvllks 38
           H+ +v+c+++    d ++l++GsdD t kvWD+ t  ++++
   Q: 153  HQKGVNCVDYftgGDkPYLITGSDDQTAKVWDYQTKSCVQT 193
           999*****966*9778*******************999986 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDLPLRLDIK KKFAQRSERV KSVDLHPTEP WILASLYSGT VCIWNYQTQT ITKSFEVTEL 60
PVRSAKFIPR KQWVVAGADD MYIRVYNYNT MDKLWDWENG WACTQIFEGH SHYVMQVVFN 120

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Nucleotide Sequence
(Fasta)

ATGGATCTGG TGATTGTGGC TTGCCAGATT TGTACTGACG ATTCGTTATT TTTTTTTTTT 60
TTTTTGGTTT TAACAGCCGC TCAGACTCGA TATCAAGGTA ATTGTTCTTC TTCATCTTCT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR006692--Coatomer_WD-assoc_reg
IPR015007--NUP2/50/61
IPR011993--PH_dom-like
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF08911--NUP50
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0030117--C:membrane coat
GO:0005643--C:nuclear pore
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence