iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017445

Ensembl Protein ID

Bra001955.1-P

UniProt Accession

M4CCM5; M4CCM5_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra001955	Bra001955.1	Bra001955.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.40e-14	52.2	54	89

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtgv 34
           Ht+ vtc+af   +d++++sGs Dg++++WD++ ++
   Q: 54   HTNFVTCVAFnpvDDNYFISGSIDGKVRIWDVSHCR 89
           9999********766****************97665 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSNLEVEAVD FEPEEDGFMD EDVGAADYLL SSSMDESVRL WRVYYDECLA TFSHTNFVTC 60
VAFNPVDDNY FISGSIDGKV RIWDVSHCRV VDYTDVRDIV TAVCYRPDAK AAVIGSITGN 120

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Nucleotide Sequence
(Fasta)

ATGTCGAACT TAGAAGTTGA AGCGGTTGAT TTTGAGCCAG AGGAGGACGG CTTCATGGAC 60
GAAGACGTCG GAGCAGCTGA TGTCTCCCCA CGCGCTGGGC ATCTGAGGAT TAGGCCAGCT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence