iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-018038

Ensembl Protein ID

Bra001960.1-P

UniProt Accession

M4CCN0; M4CCN0_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra001960	Bra001960.1	Bra001960.1-P

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	31.79	4.00e-53	206.00	IUUC-Cel-018521

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDDYLSGEEE DDYYYTSDQE SLEGLDHDQS NLHPLSSSGN TAKVITKESL LAAQREDLRR 60
VMELLSLKEH HARTLLIHHR WDVEKLFAVL VEKGKDCLFS GAGLTLAGDD PTFSPSSSMM 120

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Nucleotide Sequence
(Fasta)

ATGGATGATT ATCTGAGCGG CGAGGAGGAG GACGATTACT ATTACACCTC CGATCAAGAG 60
TCTCTCGAGG GCCTTGATCA TGATCAATCC AATCTCCACC CTCTTTCATC CTCTGGAAAT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR031127--E3_UB_ligase_RBR
IPR002867--IBR_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF01485--IBR

SMART

SM00647--IBR

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002480	Amborella trichopoda	62.24	0.00e+00	750.00
IUUC-Aly-005807	Arabidopsis lyrata	81.50	0.00e+00	994.00
IUUC-Ath-007166	Arabidopsis thaliana	81.37	0.00e+00	936.00
IUUC-Ame-011264	Astyanax mexicanus	31.72	6.00e-63	234.00
IUUC-Bdi-014685	Brachypodium distachyon	58.52	0.00e+00	703.00
IUUC-Bol-016507	Brassica oleracea	91.30	0.00e+00	1091.00
IUUC-Cel-018521	Caenorhabditis elegans	31.79	8.00e-55	207.00
IUUC-Cin-025135	Ciona intestinalis	32.63	4.00e-60	225.00
IUUC-Csv-026243	Ciona savignyi	32.45	5.00e-58	218.00
IUUC-Dre-027785	Danio rerio	30.65	4.00e-63	235.00
IUUC-Dor-030769	Dipodomys ordii	28.18	1.00e-39	157.00
IUUC-Dme-031903	Drosophila melanogaster	32.63	2.00e-63	236.00
IUUC-Eeu-034838	Erinaceus europaeus	26.80	7.00e-38	150.00
IUUC-Gmo-038703	Gadus morhua	32.06	1.00e-63	237.00
IUUC-Gac-041708	Gasterosteus aculeatus	32.28	7.00e-65	241.00
IUUC-Gma-043188	Glycine max	66.78	0.00e+00	762.00
IUUC-Lpe-051110	Leersia perrieri	61.03	0.00e+00	722.00
IUUC-Mla-058889	Melampsora laricipopulina	28.14	2.00e-47	183.00
IUUC-Mac-064550	Musa acuminata	63.48	0.00e+00	729.00
IUUC-Ont-072309	Oreochromis niloticus	32.57	5.00e-65	241.00
IUUC-Oba-075628	Oryza barthii	58.04	0.00e+00	631.00
IUUC-Obr-076492	Oryza brachyantha	63.06	0.00e+00	724.00
IUUC-Ogl-077447	Oryza glaberrima	62.88	0.00e+00	720.00
IUUC-Ogu-078881	Oryza glumaepatula	64.40	0.00e+00	723.00
IUUC-Oin-079573	Oryza indica	63.79	0.00e+00	703.00
IUUC-Olo-080774	Oryza longistaminata	64.76	0.00e+00	723.00
IUUC-Ome-081275	Oryza meridionalis	57.73	0.00e+00	632.00
IUUC-Oni-082267	Oryza nivara	57.73	0.00e+00	632.00
IUUC-Opu-084135	Oryza punctata	62.88	0.00e+00	721.00
IUUC-Oru-084849	Oryza rufipogon	64.40	0.00e+00	723.00
IUUC-Osa-085435	Oryza sativa	62.88	0.00e+00	720.00
IUUC-Ola-086792	Oryzias latipes	32.57	5.00e-65	241.00
IUUC-Pfo-096449	Poecilia formosa	32.57	4.00e-65	241.00
IUUC-Pca-100303	Procavia capensis	32.69	3.00e-41	162.00
IUUC-Ppe-101740	Prunus persica	74.50	0.00e+00	767.00
IUUC-Sit-110348	Setaria italica	61.44	0.00e+00	726.00
IUUC-Sly-111182	Solanum lycopersicum	61.32	0.00e+00	626.00
IUUC-Stu-112599	Solanum tuberosum	69.59	0.00e+00	780.00
IUUC-Sbi-114262	Sorghum bicolor	60.68	0.00e+00	722.00
IUUC-Tru-118338	Takifugu rubripes	31.99	1.00e-63	236.00
IUUC-Tni-120238	Tetraodon nigroviridis	32.07	4.00e-64	238.00
IUUC-Tca-121037	Theobroma cacao	77.13	0.00e+00	793.00
IUUC-Tae-124132	Triticum aestivum	60.60	0.00e+00	716.00
IUUC-Tur-126320	Triticum urartu	58.97	0.00e+00	643.00
IUUC-Vvi-131463	Vitis vinifera	69.23	0.00e+00	823.00
IUUC-Xma-133423	Xiphophorus maculatus	32.57	4.00e-65	241.00
IUUC-Yli-134622	Yarrowia lipolytica	30.88	6.00e-57	214.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence