iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095532

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545070

Gene Name

PHYPADRAFT_19366

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S181_27V6	PP1S181_27V6.1	PP1S181_27V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.20e-06	26.6	233	289

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwl..asggktcPvtrqplteedlvPn 58
           e f C I ++  ++ vv+++G+ +   ++ +wl   s++k+cPv++ +lte +++P 
   Q: 233  ENFECNICFQKANEAVVTCCGHLFCWPCLYRWLhvHSYHKECPVCKGSLTEYSITPI 289
           78*******************************9999******************97 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MATQLPGADN QSSTAQGSQV FGPEPEMSVS RLVDLNFSVT TPVTTYNPYM LMQQVGTQSY 60
PIFQIADSQQ LHSDQQSYVP SSIHVGNIYA APALVHHGYQ SYRPSVQEQL QGYAGLQQQN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAACAC AACTGCCTGG GGCAGACAAT CAGAGCAGCA CGGCACAAGG CTCTCAAGTT 60
TTTGGACCTG AGCCGGAAAT GTCAGTTTCG AGACTTGTCG ATTTGAACTT CAGTGTTACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_19366

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006126	Arabidopsis lyrata	54.64	1.00e-27	116.00
IUUC-Ath-007143	Arabidopsis thaliana	52.58	3.00e-27	115.00
IUUC-Bdi-014503	Brachypodium distachyon	54.72	1.00e-31	130.00
IUUC-Bol-015310	Brassica oleracea	52.58	9.00e-27	114.00
IUUC-Bra-017049	Brassica rapa	52.58	8.00e-27	114.00
IUUC-Csv-026061	Ciona savignyi	40.48	1.00e-07	50.80
IUUC-Gma-042913	Glycine max	56.70	9.00e-33	133.00
IUUC-Kpa-049242	Komagataella pastoris	37.33	9.00e-09	52.40
IUUC-Lpe-051015	Leersia perrieri	63.33	7.00e-33	134.00
IUUC-Mtr-057874	Medicago truncatula	59.34	8.00e-32	130.00
IUUC-Mac-064666	Musa acuminata	63.33	1.00e-32	134.00
IUUC-Oba-075089	Oryza barthii	62.22	1.00e-32	134.00
IUUC-Ogl-077589	Oryza glaberrima	62.22	1.00e-32	134.00
IUUC-Ogu-078192	Oryza glumaepatula	62.22	2.00e-32	133.00
IUUC-Ome-081574	Oryza meridionalis	62.22	1.00e-32	134.00
IUUC-Oru-084734	Oryza rufipogon	62.22	2.00e-32	133.00
IUUC-Osa-085691	Oryza sativa	62.22	2.00e-32	133.00
IUUC-Olu-087623	Ostreococcus lucimarinus	53.23	1.00e-17	81.60
IUUC-Pop-099797	Populus trichocarpa	58.43	3.00e-29	122.00
IUUC-Ppe-101193	Prunus persica	55.67	1.00e-30	126.00
IUUC-Ptt-103845	Puccinia triticina	37.31	4.00e-08	53.10
IUUC-Smo-109079	Selaginella moellendorffii	64.38	2.00e-26	113.00
IUUC-Sit-110715	Setaria italica	61.11	7.00e-32	131.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence