iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095490

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545340

Gene Name

PHYPADRAFT_29412

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S460_19V6	PP1S460_19V6.1	PP1S460_19V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-07	33.0	116	158

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cle f  ++ +++lp C Hvfh++C+  w         + +CPlCr
   Q: 116  CAVCLEKFneDEALRLLPqCSHVFHTECIDLW------FHSHSTCPLCR 158
           ********8755599999**************......9999******8 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MSQPTLSSSN VPSGVPPPLH AFVSSSKFNP SMAIIIVVLL CALIVVAIFS MYVRRCTQGG 60
RDETSNRVTP ARNGNQFIHF YERPGEGLDR VLVDALPVVS FSVVKTLKSG KEDLECAVCL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGCAGC CGACACTGAG TTCGAGCAAT GTTCCTTCTG GAGTACCGCC CCCTCTCCAT 60
GCATTCGTCA GCAGCAGTAA ATTTAATCCT AGTATGGCTA TCATCATTGT TGTTCTTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ppp:PHYPADRAFT_29412

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000107	Aegilops tauschii	48.28	3.00e-20	92.00
IUUC-Aly-006388	Arabidopsis lyrata	41.98	2.00e-30	125.00
IUUC-Bol-016262	Brassica oleracea	46.48	7.00e-36	144.00
IUUC-Bra-017912	Brassica rapa	46.48	9.00e-35	140.00
IUUC-Hvu-047545	Hordeum vulgare	45.45	1.00e-32	132.00
IUUC-Lpe-051270	Leersia perrieri	45.58	1.00e-32	133.00
IUUC-Mac-065356	Musa acuminata	41.89	1.00e-27	116.00
IUUC-Oba-075528	Oryza barthii	44.67	3.00e-31	128.00
IUUC-Obr-076839	Oryza brachyantha	44.67	1.00e-35	143.00
IUUC-Ogl-076953	Oryza glaberrima	45.33	2.00e-31	129.00
IUUC-Ogu-078122	Oryza glumaepatula	44.00	3.00e-31	128.00
IUUC-Oin-079189	Oryza indica	44.67	3.00e-31	128.00
IUUC-Ome-081499	Oryza meridionalis	43.45	2.00e-31	129.00
IUUC-Oni-082648	Oryza nivara	44.67	3.00e-31	128.00
IUUC-Opu-083287	Oryza punctata	43.06	2.00e-31	128.00
IUUC-Oru-084417	Oryza rufipogon	44.67	3.00e-31	128.00
IUUC-Osa-085388	Oryza sativa	45.33	2.00e-31	129.00
IUUC-Stu-112669	Solanum tuberosum	43.36	2.00e-23	102.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence