iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028834

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Si:ch211-119e14.2

Genbank Nucleotide ID

BX324131

Gene Name

DTX4 (1 of many); si:ch211-119e14.2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000076302.3	ENSDART00000111636.3	ENSDARP00000102662.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-06	30.0	494	555

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf.................kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+e++                 +   ++ +CgH++h++Cl ++ + + ++ ++ +CP+C+
   Q: 494  CTICMESLcgpsgykgpgvggisraESVGRLSQCGHQYHLQCLVAM-YNNGNKDGSLQCPTCK 555
           9*******7777766666555554322255788**********555.56677**********6 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MLLASAVVVW EWLNEHGRWR PYSPAVSHHI EAVIRSDPRG AGSVVLGQVD SRLSPYIIDL 60
QSMHQFRQDT GTLRPVRRSF YDPRSAPGQG WVWEWENDSG SWTPYDTEVS IAIQAARDRQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCAGACGCA CGCAAACAAT CGAAGAATCC TGCACATTCC TTACTAGAAT AAGAATAACA 60
TTTAAATGTC TTTACATGGC GGTCGGCGAA ACGAGCCATG CCGTGTAGGA GACCTACAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR004170--WWE-dom
IPR018123--WWE-dom_subgr
IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50918--WWE
PS50089--ZF_RING_2

Pfam

PF02825--WWE
PF00097--zf-C3HC4

SMART

SM00184--RING
SM00678--WWE

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002748	Amborella trichopoda	32.81	2.00e-05	43.90
IUUC-Ame-011471	Astyanax mexicanus	88.90	0.00e+00	1053.00
IUUC-Bra-016821	Brassica rapa	43.75	9.00e-05	41.20
IUUC-Ete-032479	Echinops telfairi	41.38	7.00e-30	125.00
IUUC-Gmo-039590	Gadus morhua	95.58	4.00e-167	581.00
IUUC-Gac-041759	Gasterosteus aculeatus	94.93	0.00e+00	662.00
IUUC-Lpe-051497	Leersia perrieri	32.39	1.00e-05	45.40
IUUC-Loc-052250	Lepisosteus oculatus	78.59	2.00e-142	499.00
IUUC-Mtr-058597	Medicago truncatula	34.38	3.00e-05	43.10
IUUC-Mac-065592	Musa acuminata	31.03	2.00e-05	43.10
IUUC-Ont-072477	Oreochromis niloticus	96.02	1.00e-179	623.00
IUUC-Obr-076395	Oryza brachyantha	34.78	3.00e-06	46.60
IUUC-Ola-086359	Oryzias latipes	73.24	4.00e-144	505.00
IUUC-Pfo-096590	Poecilia formosa	94.65	0.00e+00	658.00
IUUC-Ppe-101525	Prunus persica	34.38	9.00e-05	41.60
IUUC-Sit-110693	Setaria italica	32.81	1.00e-05	44.70
IUUC-Sbi-114218	Sorghum bicolor	37.50	3.00e-06	46.60
IUUC-Tru-118590	Takifugu rubripes	96.08	0.00e+00	627.00
IUUC-Tni-120695	Tetraodon nigroviridis	94.89	0.00e+00	652.00
IUUC-Tca-121669	Theobroma cacao	32.81	7.00e-05	42.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence