iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111287

Ensembl Protein ID

Solyc06g051230.2.1

UniProt Accession

K4C5R6; K4C5R6_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc06g051230.2	Solyc06g051230.2.1	Solyc06g051230.2.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	47.95	9.00e-34	141.00	IUUC-Ath-006889

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MDDDLINAIV MDLDLNHEPM ESSALGLGSL PNSRIEQRIL HLESVAARWR QVHNSSPNSS 60
PNSVQHHNSL GKGKGCKRDR SHLVAKALEM DVVVKKVDKN GPSFFDCNIC FDIAKEPILT 120

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Nucleotide Sequence
(Fasta)

GGCTTCTTGT CTCCGCCCCG CTCCCGCTCC CACCGTTCTG CTCAATCTTT CTTGTCTCTT 60
GTCAAGCAAA GCCGATTTTA CAACTCATGC TAAATCAGTG TATAGATACA TCCATCATCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006481	Arabidopsis lyrata	38.56	6.00e-37	147.00
IUUC-Ath-006889	Arabidopsis thaliana	38.43	3.00e-37	148.00
IUUC-Bra-017862	Brassica rapa	38.30	4.00e-38	151.00
IUUC-Gma-042703	Glycine max	35.95	3.00e-29	121.00
IUUC-Mtr-058658	Medicago truncatula	38.87	7.00e-48	184.00
IUUC-Pop-099746	Populus trichocarpa	38.91	5.00e-46	177.00
IUUC-Ppe-101798	Prunus persica	41.21	2.00e-54	205.00
IUUC-Stu-112210	Solanum tuberosum	55.28	6.00e-80	290.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence