iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sre-115188

Ensembl Protein ID

CBQ69545

UniProt Accession

E6ZQN8; E6ZQN8_SPORE

Genbank Protein ID

CBQ69545.1

Protein Name

Ribosome biogenesis protein ERB1; Eukaryotic ribosome biogenesis protein 1

Genbank Nucleotide ID

FQ311437

Gene Name

ERB1; sr16047

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
sr16047	CBQ69545	CBQ69545

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.20e-10	37.0	542	577

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           ++v+cl+  ++ + l++G+dDg  ++W++  g+++ 
   Q: 542  GRVRCLSVdPTgHWLLTGGDDGRARLWEVAIGRCTA 577
           579*****977799***************9999875 PP

Organism

Sporisorium reilianum

Functional Description
(View)

Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MARPSTSSSA SASSARNGTT KRKRNLPPTT TATTKAPTAT KGKSKAKALE LDLAASDDDE 60
QADLGPASDD EDADQPGDAS DDDEQDEFLE IDLEASDDDD NDEEDADDES VELQDSQAEQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCCGCC CGTCCACTTC CAGCTCAGCG TCGGCCTCGT CCGCTCGCAA CGGCACAACA 60
AAGCGGAAGC GCAACCTGCC ACCAACTACC ACCGCCACCA CAAAAGCACC CACCGCAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0070180--F:large ribosomal subunit rRNA binding
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	42.38	1.00e-68	252.00
IUUC-Aml-001507	Ailuropoda melanoleuca	42.68	9.00e-137	478.00
IUUC-Atr-003141	Amborella trichopoda	36.32	4.00e-72	263.00
IUUC-Apl-003545	Anas platyrhynchos	40.38	3.00e-124	436.00
IUUC-Aly-005649	Arabidopsis lyrata	38.50	2.00e-125	441.00
IUUC-Ath-007625	Arabidopsis thaliana	38.68	2.00e-119	421.00
IUUC-Ago-007958	Ashbya gossypii	44.26	4.00e-166	576.00
IUUC-Acl-008344	Aspergillus clavatus	46.03	9.00e-156	542.00
IUUC-Afl-008616	Aspergillus flavus	46.58	4.00e-157	546.00
IUUC-Afu-009083	Aspergillus fumigatus	46.16	2.00e-150	524.00
IUUC-Ani-009365	Aspergillus nidulans	46.49	7.00e-156	542.00
IUUC-Ang-009796	Aspergillus niger	43.78	3.00e-154	537.00
IUUC-Aor-010015	Aspergillus oryzae	46.58	5.00e-157	546.00
IUUC-Ate-010537	Aspergillus terreus	45.92	3.00e-157	547.00
IUUC-Ame-011767	Astyanax mexicanus	48.15	5.00e-65	239.00
IUUC-Bgr-012286	Blumeria graminis	46.47	3.00e-160	557.00
IUUC-Bta-013569	Bos taurus	43.96	1.00e-147	515.00
IUUC-Bci-013820	Botrytis cinerea	45.95	7.00e-154	536.00
IUUC-Bdi-014895	Brachypodium distachyon	39.25	2.00e-124	437.00
IUUC-Bol-016099	Brassica oleracea	37.84	3.00e-127	447.00
IUUC-Bra-017174	Brassica rapa	37.99	2.00e-127	449.00
IUUC-Cel-018201	Caenorhabditis elegans	40.30	2.00e-121	427.00
IUUC-Cja-019009	Callithrix jacchus	48.50	9.00e-95	339.00
IUUC-Cfa-020173	Canis familiaris	42.37	2.00e-139	487.00
IUUC-Cpo-021796	Cavia porcellus	45.33	2.00e-149	521.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	45.99	1.00e-85	309.00
IUUC-Csa-023440	Chlorocebus sabaeus	44.65	3.00e-156	543.00
IUUC-Cin-025782	Ciona intestinalis	41.77	6.00e-145	506.00
IUUC-Csv-026352	Ciona savignyi	39.68	1.00e-138	485.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	40.60	3.00e-123	434.00
IUUC-Cne-027004	Cryptococcus neoformans	47.99	0.00e+00	686.00
IUUC-Cme-027242	Cyanidioschyzon merolae	36.25	6.00e-112	396.00
IUUC-Dre-028658	Danio rerio	43.95	2.00e-155	540.00
IUUC-Dno-028883	Dasypus novemcinctus	45.07	1.00e-153	535.00
IUUC-Dor-031031	Dipodomys ordii	44.40	5.00e-153	533.00
IUUC-Dse-031443	Dothistroma septosporum	44.58	2.00e-163	567.00
IUUC-Dme-031786	Drosophila melanogaster	40.28	1.00e-147	515.00
IUUC-Eca-033677	Equus caballus	45.32	6.00e-152	529.00
IUUC-Eeu-035310	Erinaceus europaeus	42.15	4.00e-117	413.00
IUUC-Fca-035888	Felis catus	43.89	8.00e-153	532.00
IUUC-Fal-037438	Ficedula albicollis	39.87	9.00e-110	389.00
IUUC-Fox-037973	Fusarium oxysporum	44.31	8.00e-162	562.00
IUUC-Fso-038187	Fusarium solani	43.80	3.00e-161	560.00
IUUC-Gmo-039114	Gadus morhua	40.24	3.00e-132	463.00
IUUC-Ggr-039746	Gaeumannomyces graminis	43.88	1.00e-161	561.00
IUUC-Gga-040631	Gallus gallus	42.40	3.00e-80	290.00
IUUC-Gac-042582	Gasterosteus aculeatus	40.44	5.00e-140	489.00
IUUC-Gma-044215	Glycine max	39.88	5.00e-126	443.00
IUUC-Ggo-045587	Gorilla gorilla	44.83	7.00e-157	545.00
IUUC-Hsa-046319	Homo sapiens	44.95	3.00e-157	547.00
IUUC-Hvu-047526	Hordeum vulgare	40.00	1.00e-119	422.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	44.28	9.00e-151	525.00
IUUC-Kpa-049221	Komagataella pastoris	42.67	1.00e-158	551.00
IUUC-Lch-049640	Latimeria chalumnae	44.15	2.00e-161	561.00
IUUC-Lpe-051135	Leersia perrieri	42.61	2.00e-69	255.00
IUUC-Loc-051930	Lepisosteus oculatus	43.91	9.00e-160	555.00
IUUC-Lma-053290	Leptosphaeria maculans	43.39	9.00e-157	545.00
IUUC-Laf-053903	Loxodonta africana	42.30	6.00e-130	456.00
IUUC-Mcc-055471	Macaca mulatta	44.65	1.00e-156	545.00
IUUC-Meu-056190	Macropus eugenii	45.20	5.00e-152	530.00
IUUC-Mor-057135	Magnaporthe oryzae	44.52	2.00e-156	544.00
IUUC-Mpo-057475	Magnaporthe poae	43.27	1.00e-148	518.00
IUUC-Mtr-058689	Medicago truncatula	37.38	7.00e-113	399.00
IUUC-Mla-059149	Melampsora laricipopulina	50.43	0.00e+00	697.00
IUUC-Mga-059645	Meleagris gallopavo	38.35	9.00e-49	184.00
IUUC-Mvi-060485	Microbotryum violaceum	47.99	0.00e+00	644.00
IUUC-Mmr-061674	Microcebus murinus	44.07	9.00e-151	525.00
IUUC-Mdo-062973	Monodelphis domestica	45.40	1.00e-158	552.00
IUUC-Mmu-064180	Mus musculus	43.89	2.00e-148	518.00
IUUC-Mac-064535	Musa acuminata	36.04	3.00e-76	278.00
IUUC-Mpu-066406	Mustela putorius furo	45.17	2.00e-154	538.00
IUUC-Mlu-067795	Myotis lucifugus	44.73	6.00e-144	502.00
IUUC-Nfi-068516	Neosartorya fischeri	45.88	6.00e-143	499.00
IUUC-Ncr-068767	Neurospora crassa	44.27	6.00e-149	519.00
IUUC-Opr-071084	Ochotona princeps	38.92	2.00e-54	204.00
IUUC-Ont-071614	Oreochromis niloticus	43.27	7.00e-153	532.00
IUUC-Oba-075980	Oryza barthii	43.23	3.00e-70	257.00
IUUC-Obr-076799	Oryza brachyantha	42.94	3.00e-75	274.00
IUUC-Ogl-077134	Oryza glaberrima	40.33	8.00e-120	422.00
IUUC-Ogu-078655	Oryza glumaepatula	38.52	3.00e-117	414.00
IUUC-Oin-079654	Oryza indica	40.33	2.00e-119	421.00
IUUC-Olo-080706	Oryza longistaminata	43.52	8.00e-70	256.00
IUUC-Ome-081716	Oryza meridionalis	43.80	2.00e-70	258.00
IUUC-Oni-082508	Oryza nivara	38.22	4.00e-113	400.00
IUUC-Opu-083707	Oryza punctata	43.52	1.00e-69	256.00
IUUC-Oru-084453	Oryza rufipogon	43.52	8.00e-70	256.00
IUUC-Osa-085811	Oryza sativa	40.18	2.00e-119	421.00
IUUC-Ola-087361	Oryzias latipes	44.81	2.00e-159	554.00
IUUC-Oga-088015	Otolemur garnettii	44.19	1.00e-155	541.00
IUUC-Oar-090058	Ovis aries	50.30	6.00e-47	180.00
IUUC-Ptr-090631	Pan troglodytes	49.62	1.00e-69	254.00
IUUC-Pan-092306	Papio anubis	44.73	9.00e-156	542.00
IUUC-Pma-094622	Petromyzon marinus	44.61	3.00e-160	556.00
IUUC-Pno-094794	Phaeosphaeria nodorum	40.75	4.00e-144	503.00
IUUC-Ppa-095528	Physcomitrella patens	37.34	3.00e-79	287.00
IUUC-Pfo-096682	Poecilia formosa	42.28	5.00e-156	543.00
IUUC-Pab-097939	Pongo abelii	43.04	2.00e-135	474.00
IUUC-Pop-099043	Populus trichocarpa	39.36	2.00e-115	407.00
IUUC-Pca-100333	Procavia capensis	43.65	1.00e-148	518.00
IUUC-Ppe-102078	Prunus persica	38.06	3.00e-118	417.00
IUUC-Pgr-103525	Puccinia graminis	48.66	0.00e+00	667.00
IUUC-Ptt-103929	Puccinia triticina	48.38	0.00e+00	642.00
IUUC-Pte-104029	Pyrenophora teres	44.54	2.00e-166	577.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	44.54	6.00e-166	575.00
IUUC-Rno-105248	Rattus norvegicus	44.34	1.00e-150	525.00
IUUC-Sce-106381	Saccharomyces cerevisiae	44.17	1.00e-163	568.00
IUUC-Sha-106519	Sarcophilus harrisii	45.58	8.00e-158	548.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	41.03	8.00e-144	502.00
IUUC-Spo-108071	Schizosaccharomyces pombe	42.47	4.00e-141	493.00
IUUC-Smo-109604	Selaginella moellendorffii	39.56	1.00e-121	429.00
IUUC-Sit-110551	Setaria italica	40.57	5.00e-121	426.00
IUUC-Sly-110970	Solanum lycopersicum	41.62	9.00e-71	259.00
IUUC-Stu-112593	Solanum tuberosum	38.75	1.00e-125	441.00
IUUC-Sar-113123	Sorex araneus	45.88	3.00e-58	216.00
IUUC-Sbi-113945	Sorghum bicolor	40.30	4.00e-123	433.00
IUUC-Ssc-115352	Sus scrofa	46.23	2.00e-94	337.00
IUUC-Tru-117685	Takifugu rubripes	43.71	2.00e-156	544.00
IUUC-Tni-119982	Tetraodon nigroviridis	43.52	1.00e-150	525.00
IUUC-Tca-121664	Theobroma cacao	39.61	3.00e-130	457.00
IUUC-Tre-122229	Trichoderma reesei	42.63	5.00e-139	486.00
IUUC-Tvi-122576	Trichoderma virens	44.27	6.00e-140	489.00
IUUC-Tae-124110	Triticum aestivum	40.06	2.00e-112	397.00
IUUC-Tur-126781	Triticum urartu	42.50	3.00e-64	238.00
IUUC-Tme-127080	Tuber melanosporum	50.07	0.00e+00	633.00
IUUC-Ttr-128514	Tursiops truncatus	42.29	5.00e-98	350.00
IUUC-Uma-129556	Ustilago maydis	92.44	0.00e+00	1406.00
IUUC-Vda-129715	Verticillium dahliae	45.44	2.00e-158	551.00
IUUC-Vvi-131211	Vitis vinifera	37.48	3.00e-120	424.00
IUUC-Xma-133883	Xiphophorus maculatus	42.64	3.00e-151	527.00
IUUC-Yli-134438	Yarrowia lipolytica	42.17	4.00e-149	520.00
IUUC-Zma-135341	Zea mays	36.38	2.00e-115	408.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence