iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098940

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000344

Gene Name

XM_002330314.1; POPTR_0008s22810g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s22810	POPTR_0008s22810.1	POPTR_0008s22810.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/APC_C/APC_C	28.43	3.00e-50	197.00	IUUC-Hsa-046926

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKSGNQKPAP IPVGSHKNKV LLEPRQVGVN DTHFIGTDPN LKTIQTTCRL NRAGWGFPSR 60
KSTRGDAFGF PKFSPESTLS SLQASVSVWF WIQKWMCRRI KSQLFSTTNS TIPLKSSFLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGTCGG GCAATCAAAA ACCTGCCCCT ATCCCTGTCG GGTCACATAA AAATAAGGTT 60
CTTCTTGAGC CCAGACAAGT CGGGGTAAAC GACACCCATT TCATTGGGAC GGATCCAAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0802--TPR repeat

Interpro

IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat

PROSITE

PS50005--TPR
PS50293--TPR_REGION

Pfam

PF13181--TPR_8

SMART

SM00028--TPR

KEGG

pop:POPTR_0008s22810g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002083	Ailuropoda melanoleuca	28.34	7.00e-50	191.00
IUUC-Atr-003140	Amborella trichopoda	68.04	0.00e+00	663.00
IUUC-Apl-003343	Anas platyrhynchos	28.34	8.00e-50	191.00
IUUC-Aca-005258	Anolis carolinensis	28.49	2.00e-50	192.00
IUUC-Aly-005478	Arabidopsis lyrata	76.52	0.00e+00	697.00
IUUC-Ath-007040	Arabidopsis thaliana	75.54	0.00e+00	714.00
IUUC-Ame-010782	Astyanax mexicanus	28.69	1.00e-52	200.00
IUUC-Bdi-014872	Brachypodium distachyon	67.58	0.00e+00	657.00
IUUC-Bol-016501	Brassica oleracea	74.66	0.00e+00	697.00
IUUC-Bra-018097	Brassica rapa	74.66	0.00e+00	702.00
IUUC-Cja-018884	Callithrix jacchus	28.34	1.00e-49	190.00
IUUC-Cfa-020235	Canis familiaris	28.34	1.00e-49	190.00
IUUC-Cpo-021616	Cavia porcellus	28.14	1.00e-48	187.00
IUUC-Cho-024848	Choloepus hoffmanni	31.68	1.00e-17	84.30
IUUC-Csv-026317	Ciona savignyi	25.26	5.00e-31	128.00
IUUC-Dre-028548	Danio rerio	28.82	2.00e-54	206.00
IUUC-Dno-029381	Dasypus novemcinctus	28.97	4.00e-46	178.00
IUUC-Dor-030225	Dipodomys ordii	27.64	1.00e-35	144.00
IUUC-Dme-031693	Drosophila melanogaster	24.16	2.00e-22	100.00
IUUC-Eca-033603	Equus caballus	28.34	1.00e-49	190.00
IUUC-Eeu-035107	Erinaceus europaeus	32.20	5.00e-11	62.00
IUUC-Fca-036408	Felis catus	28.34	1.00e-49	190.00
IUUC-Fal-036872	Ficedula albicollis	27.92	3.00e-49	189.00
IUUC-Gmo-039212	Gadus morhua	28.09	5.00e-50	191.00
IUUC-Gga-040183	Gallus gallus	27.83	4.00e-46	178.00
IUUC-Gac-041690	Gasterosteus aculeatus	28.49	4.00e-54	205.00
IUUC-Gma-042697	Glycine max	80.47	0.00e+00	785.00
IUUC-Ggo-045188	Gorilla gorilla	26.10	2.00e-35	143.00
IUUC-Hsa-046926	Homo sapiens	28.34	1.00e-49	190.00
IUUC-Hvu-047507	Hordeum vulgare	52.17	1.00e-52	198.00
IUUC-Itr-048217	Ictidomys tridecemlineatus	28.34	3.00e-50	192.00
IUUC-Lch-050119	Latimeria chalumnae	27.53	1.00e-47	183.00
IUUC-Lpe-050905	Leersia perrieri	67.98	0.00e+00	676.00
IUUC-Loc-052439	Lepisosteus oculatus	28.97	2.00e-52	199.00
IUUC-Laf-054340	Loxodonta africana	28.34	1.00e-49	190.00
IUUC-Meu-056210	Macropus eugenii	28.14	2.00e-49	189.00
IUUC-Mtr-058264	Medicago truncatula	79.96	0.00e+00	807.00
IUUC-Mga-059761	Meleagris gallopavo	27.92	1.00e-49	190.00
IUUC-Mmr-061752	Microcebus murinus	26.69	3.00e-39	155.00
IUUC-Mdo-063053	Monodelphis domestica	28.14	2.00e-49	189.00
IUUC-Mmu-064183	Mus musculus	28.14	2.00e-48	186.00
IUUC-Mac-064710	Musa acuminata	76.47	0.00e+00	733.00
IUUC-Mpu-065854	Mustela putorius furo	28.34	7.00e-50	191.00
IUUC-Mlu-067159	Myotis lucifugus	28.34	8.00e-50	191.00
IUUC-Nle-069297	Nomascus leucogenys	27.35	2.00e-45	176.00
IUUC-Opr-070794	Ochotona princeps	30.43	8.00e-23	101.00
IUUC-Ont-071802	Oreochromis niloticus	28.29	2.00e-53	202.00
IUUC-Oan-073628	Ornithorhynchus anatinus	28.74	2.00e-48	186.00
IUUC-Ocu-074743	Oryctolagus cuniculus	28.34	1.00e-49	190.00
IUUC-Oba-075920	Oryza barthii	69.09	0.00e+00	662.00
IUUC-Obr-076650	Oryza brachyantha	69.49	0.00e+00	671.00
IUUC-Ogl-077604	Oryza glaberrima	69.09	0.00e+00	663.00
IUUC-Ogu-078587	Oryza glumaepatula	69.29	0.00e+00	664.00
IUUC-Oin-079624	Oryza indica	69.09	0.00e+00	663.00
IUUC-Ome-081464	Oryza meridionalis	68.90	0.00e+00	661.00
IUUC-Oni-082743	Oryza nivara	69.09	0.00e+00	662.00
IUUC-Opu-083895	Oryza punctata	68.57	0.00e+00	652.00
IUUC-Oru-085274	Oryza rufipogon	68.90	0.00e+00	659.00
IUUC-Osa-085306	Oryza sativa	68.90	0.00e+00	661.00
IUUC-Ola-086494	Oryzias latipes	28.14	1.00e-53	204.00
IUUC-Olu-087678	Ostreococcus lucimarinus	32.43	2.00e-51	196.00
IUUC-Oga-088978	Otolemur garnettii	28.34	3.00e-49	189.00
IUUC-Oar-089894	Ovis aries	28.23	4.00e-48	185.00
IUUC-Pan-091984	Papio anubis	27.35	5.00e-44	171.00
IUUC-Psi-094087	Pelodiscus sinensis	28.97	9.00e-46	177.00
IUUC-Ppa-095620	Physcomitrella patens	59.30	5.00e-169	587.00
IUUC-Pfo-097117	Poecilia formosa	28.49	1.00e-50	193.00
IUUC-Ppe-101732	Prunus persica	82.62	0.00e+00	783.00
IUUC-Pva-103096	Pteropus vampyrus	28.34	1.00e-49	190.00
IUUC-Rno-104947	Rattus norvegicus	28.14	9.00e-49	187.00
IUUC-Sha-107198	Sarcophilus harrisii	28.14	1.00e-49	190.00
IUUC-Smo-109520	Selaginella moellendorffii	58.46	7.00e-164	570.00
IUUC-Sit-110721	Setaria italica	70.10	0.00e+00	681.00
IUUC-Sly-111676	Solanum lycopersicum	76.03	0.00e+00	800.00
IUUC-Sar-113646	Sorex araneus	28.34	1.00e-49	190.00
IUUC-Sbi-114239	Sorghum bicolor	66.54	0.00e+00	668.00
IUUC-Ssc-115401	Sus scrofa	28.23	3.00e-48	185.00
IUUC-Tgu-116712	Taeniopygia guttata	28.11	6.00e-50	191.00
IUUC-Tru-117766	Takifugu rubripes	28.88	6.00e-54	204.00
IUUC-Tni-119801	Tetraodon nigroviridis	28.57	5.00e-53	201.00
IUUC-Tca-121284	Theobroma cacao	83.52	0.00e+00	838.00
IUUC-Tae-123683	Triticum aestivum	67.91	0.00e+00	671.00
IUUC-Tur-126825	Triticum urartu	57.62	3.00e-172	597.00
IUUC-Tbe-127885	Tupaia belangeri	31.03	2.00e-19	90.50
IUUC-Ttr-128641	Tursiops truncatus	28.34	6.00e-48	184.00
IUUC-Vpa-130810	Vicugna pacos	31.00	3.00e-18	86.30
IUUC-Vvi-131044	Vitis vinifera	81.87	0.00e+00	812.00
IUUC-Xtr-132617	Xenopus tropicalis	28.54	6.00e-50	191.00
IUUC-Xma-133575	Xiphophorus maculatus	28.49	3.00e-50	192.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence