iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggo-044748

Ensembl Protein ID

ENSGGOP00000013058.2

UniProt Accession

G3RC37; G3RC37_GORGO

Protein Name

Uncharacterized protein

Gene Name

WDR55

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGGOG00000013388.2	ENSGGOT00000013435.2	ENSGGOP00000013058.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-23	80.9	126	157

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrt 32
           H +++++l + +++ l++G d g i++WD r+
   Q: 126  HGAPINSLLLvDENVLATGDDTGGIRLWDQRK 157
           999*****77555****************765 PP

Organism

Gorilla gorilla

Protein Sequence
(Fasta)

MDRTCEERPA EDGSDEEDPD SMEAPTRIRD TPEDIVLEAP ASGLAFHPAR DLLAAGDVDG 60
DVFVFSYSCQ EGETKELWSS GHHLKACRAV AFSEDGQKLI TVSKDKAIHV LDVEQGRLER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACCGCA CTTGTGAGGA GAGGCCCGCT GAGGATGGGA GCGACGAGGA GGACCCAGAC 60
TCCATGGAAG CCCCAACCCG GATCCGGGAC ACTCCGGAAG ACATCGTGCT GGAAGCTCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR017422--WDR55

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005730--C:nucleolus
GO:0006364--P:rRNA processing

KEGG

ggo:101149027

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000562	Aegilops tauschii	37.02	6.00e-48	184.00
IUUC-Aml-001768	Ailuropoda melanoleuca	93.99	0.00e+00	744.00
IUUC-Atr-002764	Amborella trichopoda	35.53	2.00e-22	98.60
IUUC-Apl-003880	Anas platyrhynchos	65.02	4.00e-117	416.00
IUUC-Aca-005060	Anolis carolinensis	67.11	9.00e-151	527.00
IUUC-Aly-006484	Arabidopsis lyrata	36.15	2.00e-49	189.00
IUUC-Ath-006652	Arabidopsis thaliana	38.31	6.00e-58	217.00
IUUC-Bta-013497	Bos taurus	93.50	0.00e+00	711.00
IUUC-Bdi-014378	Brachypodium distachyon	38.44	5.00e-57	214.00
IUUC-Bol-016352	Brassica oleracea	38.64	9.00e-60	223.00
IUUC-Bra-017103	Brassica rapa	38.64	4.00e-60	224.00
IUUC-Cel-018192	Caenorhabditis elegans	23.86	8.00e-15	74.70
IUUC-Cja-018792	Callithrix jacchus	95.05	0.00e+00	707.00
IUUC-Cfa-020739	Canis familiaris	93.61	0.00e+00	711.00
IUUC-Cpo-022331	Cavia porcellus	92.95	0.00e+00	710.00
IUUC-Cre-022921	Chlamydomonas reinhardtii	40.43	6.00e-37	146.00
IUUC-Csa-023414	Chlorocebus sabaeus	97.13	0.00e+00	765.00
IUUC-Cho-024600	Choloepus hoffmanni	93.75	0.00e+00	648.00
IUUC-Cin-025565	Ciona intestinalis	38.36	7.00e-63	234.00
IUUC-Csv-026294	Ciona savignyi	39.59	3.00e-62	231.00
IUUC-Cne-026979	Cryptococcus neoformans	33.68	8.00e-41	160.00
IUUC-Cme-027192	Cyanidioschyzon merolae	25.83	9.00e-21	94.40
IUUC-Dre-028492	Danio rerio	63.61	2.00e-128	451.00
IUUC-Dno-030050	Dasypus novemcinctus	89.65	0.00e+00	642.00
IUUC-Dor-030386	Dipodomys ordii	82.09	9.00e-173	599.00
IUUC-Dse-031203	Dothistroma septosporum	24.58	2.00e-12	67.00
IUUC-Dme-032012	Drosophila melanogaster	34.58	2.00e-60	226.00
IUUC-Ete-032491	Echinops telfairi	88.53	0.00e+00	679.00
IUUC-Eca-033583	Equus caballus	95.32	0.00e+00	722.00
IUUC-Eeu-034976	Erinaceus europaeus	94.48	7.00e-176	609.00
IUUC-Fca-036417	Felis catus	90.34	0.00e+00	690.00
IUUC-Gmo-039505	Gadus morhua	65.48	3.00e-138	484.00
IUUC-Ggr-039978	Gaeumannomyces graminis	23.75	3.00e-11	62.80
IUUC-Gga-040732	Gallus gallus	70.41	2.00e-146	511.00
IUUC-Gac-041313	Gasterosteus aculeatus	64.29	8.00e-135	473.00
IUUC-Gma-044122	Glycine max	40.34	2.00e-58	219.00
IUUC-Hsa-046943	Homo sapiens	98.96	0.00e+00	776.00
IUUC-Hvu-047659	Hordeum vulgare	37.54	3.00e-55	208.00
IUUC-Itr-048110	Ictidomys tridecemlineatus	92.84	0.00e+00	676.00
IUUC-Lch-050331	Latimeria chalumnae	59.05	1.00e-113	402.00
IUUC-Lpe-051193	Leersia perrieri	39.79	2.00e-59	222.00
IUUC-Loc-051946	Lepisosteus oculatus	66.57	3.00e-134	472.00
IUUC-Laf-054035	Loxodonta africana	91.99	0.00e+00	686.00
IUUC-Mcc-055285	Macaca mulatta	96.76	5.00e-103	365.00
IUUC-Meu-056596	Macropus eugenii	84.37	9.00e-171	592.00
IUUC-Mor-056995	Magnaporthe oryzae	24.12	4.00e-12	65.90
IUUC-Mtr-058637	Medicago truncatula	40.40	5.00e-58	218.00
IUUC-Mga-059839	Meleagris gallopavo	71.05	4.00e-95	342.00
IUUC-Mdo-062868	Monodelphis domestica	82.78	1.00e-174	606.00
IUUC-Mmu-064305	Mus musculus	88.27	0.00e+00	674.00
IUUC-Mac-065041	Musa acuminata	39.08	2.00e-58	219.00
IUUC-Mpu-066779	Mustela putorius furo	93.47	0.00e+00	696.00
IUUC-Mlu-067223	Myotis lucifugus	93.09	0.00e+00	671.00
IUUC-Ncr-068919	Neurospora crassa	24.68	4.00e-08	52.40
IUUC-Nle-069852	Nomascus leucogenys	98.69	0.00e+00	724.00
IUUC-Ont-072452	Oreochromis niloticus	66.67	4.00e-139	487.00
IUUC-Oan-073163	Ornithorhynchus anatinus	82.07	1.00e-64	238.00
IUUC-Ocu-074628	Oryctolagus cuniculus	95.04	0.00e+00	716.00
IUUC-Oba-075868	Oryza barthii	39.08	2.00e-56	213.00
IUUC-Obr-076768	Oryza brachyantha	39.44	5.00e-58	218.00
IUUC-Ogl-077424	Oryza glaberrima	39.79	3.00e-59	222.00
IUUC-Ogu-078847	Oryza glumaepatula	39.44	6.00e-57	214.00
IUUC-Oin-079495	Oryza indica	39.79	3.00e-59	222.00
IUUC-Olo-080268	Oryza longistaminata	39.44	7.00e-57	214.00
IUUC-Ome-081709	Oryza meridionalis	39.23	1.00e-50	193.00
IUUC-Oni-082749	Oryza nivara	39.79	3.00e-59	222.00
IUUC-Opu-084023	Oryza punctata	33.10	6.00e-40	157.00
IUUC-Oru-084764	Oryza rufipogon	39.44	6.00e-57	214.00
IUUC-Osa-086009	Oryza sativa	39.79	3.00e-59	221.00
IUUC-Ola-086463	Oryzias latipes	61.26	5.00e-129	454.00
IUUC-Olu-087897	Ostreococcus lucimarinus	31.93	4.00e-43	168.00
IUUC-Oga-089114	Otolemur garnettii	92.72	0.00e+00	713.00
IUUC-Ptr-090556	Pan troglodytes	99.22	0.00e+00	778.00
IUUC-Pan-092828	Papio anubis	97.65	0.00e+00	769.00
IUUC-Psi-093609	Pelodiscus sinensis	74.01	2.00e-121	430.00
IUUC-Pma-094413	Petromyzon marinus	53.82	6.00e-102	363.00
IUUC-Ppa-095422	Physcomitrella patens	38.26	1.00e-65	243.00
IUUC-Pfo-096389	Poecilia formosa	65.18	2.00e-131	461.00
IUUC-Pab-098095	Pongo abelii	98.43	0.00e+00	773.00
IUUC-Pop-099612	Populus trichocarpa	39.58	6.00e-55	207.00
IUUC-Pca-100408	Procavia capensis	91.99	0.00e+00	687.00
IUUC-Ppe-101931	Prunus persica	35.77	1.00e-55	209.00
IUUC-Pva-102549	Pteropus vampyrus	93.39	0.00e+00	697.00
IUUC-Rno-105079	Rattus norvegicus	91.46	0.00e+00	700.00
IUUC-Sha-107299	Sarcophilus harrisii	84.66	4.00e-162	565.00
IUUC-Sja-107829	Schizosaccharomyces japonicus	28.97	6.00e-22	98.20
IUUC-Spo-108122	Schizosaccharomyces pombe	30.53	3.00e-28	119.00
IUUC-Smo-109613	Selaginella moellendorffii	39.65	5.00e-51	194.00
IUUC-Sit-110263	Setaria italica	38.73	3.00e-57	215.00
IUUC-Sly-110988	Solanum lycopersicum	37.46	2.00e-53	202.00
IUUC-Stu-112713	Solanum tuberosum	37.81	2.00e-54	206.00
IUUC-Sbi-114617	Sorghum bicolor	37.68	5.00e-55	207.00
IUUC-Sre-115136	Sporisorium reilianum	30.67	6.00e-13	68.60
IUUC-Ssc-116268	Sus scrofa	92.99	0.00e+00	722.00
IUUC-Tgu-116720	Taeniopygia guttata	61.66	7.00e-89	321.00
IUUC-Tru-117977	Takifugu rubripes	66.07	3.00e-131	461.00
IUUC-Tsy-119121	Tarsius syrichta	92.27	1.00e-117	416.00
IUUC-Tni-119904	Tetraodon nigroviridis	68.75	2.00e-133	469.00
IUUC-Tca-121718	Theobroma cacao	40.99	9.00e-60	223.00
IUUC-Tae-124364	Triticum aestivum	37.89	3.00e-55	209.00
IUUC-Tme-126922	Tuber melanosporum	22.16	7.00e-12	65.50
IUUC-Tbe-127276	Tupaia belangeri	92.93	9.00e-156	542.00
IUUC-Uma-129505	Ustilago maydis	32.52	3.00e-13	69.70
IUUC-Vpa-130276	Vicugna pacos	95.22	8.00e-140	488.00
IUUC-Vvi-131377	Vitis vinifera	39.58	1.00e-57	218.00
IUUC-Xtr-132529	Xenopus tropicalis	69.01	3.00e-146	512.00
IUUC-Xma-134177	Xiphophorus maculatus	64.88	5.00e-124	437.00
IUUC-Yli-134665	Yarrowia lipolytica	23.97	6.00e-08	51.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence