iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-006999

UUCD1 version

UUC-ArT-01404

Ensembl Protein ID

AT2G34000.1

UniProt Accession

O22953; O22953_ARATH

Genbank Protein ID

AAB67618.1; AAY63564.1; ABK32155.1; AEC08905.1

Protein Name

At2g34000; Putative uncharacterized protein At2g34000; RING domain protein; RING/U-box superfamily protein

Genbank Nucleotide ID

AC002341; DQ059092; BT029341; CP002685

Gene Name

At2g34000; T14G11.12; T14G11_12

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT2G34000	AT2G34000.1	AT2G34000.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	16339806

Classification

Family	E-value	Score	Start	End
E3 activity/RING/RING	3.40e-07	31.6	91	133

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgpl..vlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl  + + ++  vlp C H+f ++C+ kw         +++CP+Cr
   Q: 91   CPVCLGLIPKNVVikVLPnCMHMFDEECIGKW------LESHATCPVCR 133
           ******9955566234669*************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MGFNDPSLNT IILWFASVTS LVTISVIFAL LIICLLKRRR FDVSPETENE NQGRREPRCQ 60
GLSASVIAAF PTFSYKPDNN DPESNNQEIE CPVCLGLIPK NVVIKVLPNC MHMFDEECIG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAATAAACTA ATCCCATTTG TGGTTTACCG ATTCAAATCA ACCATATTCT TTAATTCAAC 60
TGATAATATC ATAATGTTCC CAAGTTCATT ATAGTGGTGA TCGTATTTCA ACTCTTAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

ath:AT2G34000

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005979	Arabidopsis lyrata	94.37	4.00e-77	278.00
IUUC-Bol-015432	Brassica oleracea	81.70	2.00e-69	253.00
IUUC-Bra-017204	Brassica rapa	82.67	5.00e-69	253.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence