iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007487

Ensembl Protein ID

AT2G32350.1

UniProt Accession

F4ITP6; F4ITP6_ARATH

Genbank Protein ID

AEC08672.1

Protein Name

Ubiquitin-like superfamily protein

Genbank Nucleotide ID

CP002685

Gene Name

At2g32350; T32F6.13; T32F6_13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT2G32350	AT2G32350.1	AT2G32350.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	3.60e-24	85.3	77	144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 3    vtvksldgseltlkvnpsdtVaeLKekiekklgippeqqrLiykGkiL.eddktLadyglkdgstihll 70
           vtvk +  + +t++v++++tV+ LK+ki+  +++p  +++L+y+G++L +d + L++yg+++ s i++ 
   Q: 77   VTVKFPS-KQFTVEVDRTETVSSLKDKIHIVENTPIKRMQLYYSGIELaDDYRNLNEYGITEFSEIVVF 144
           5555555.399*************************************9999********999998875 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MEISEQESVL EVKKRLGQFL QIPTSSITLF VSCWELIDGL DIEDYPIISH GTRIDLTVTP 60
LFTAPSFIHA AVRKIHVTVK FPSKQFTVEV DRTETVSSLK DKIHIVENTP IKRMQLYYSG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTGACAATT GTTTCATACA CACAAGAATT CACAATGGAA ATCAGCGAAC AAGAATCTGT 60
GTTGGAGGTC AAGAAACGTC TAGGACAGTT TCTTCAGATA CCAACATCTT CTATAACTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0002--3D-structure
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom

PROSITE

PS50053--UBIQUITIN_2

Pfam

PF00240--ubiquitin

SMART

SM00213--UBQ

KEGG

ath:AT2G32350

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005449	Arabidopsis lyrata	96.69	7.00e-139	485.00
IUUC-Bol-016422	Brassica oleracea	89.26	4.00e-130	456.00
IUUC-Bra-017026	Brassica rapa	89.26	4.00e-130	456.00
IUUC-Gma-042810	Glycine max	57.02	1.00e-77	281.00
IUUC-Mtr-058444	Medicago truncatula	55.79	4.00e-80	290.00
IUUC-Olo-080674	Oryza longistaminata	24.29	7.00e-08	50.40
IUUC-Pop-098832	Populus trichocarpa	58.59	9.00e-69	251.00
IUUC-Ppe-101165	Prunus persica	56.20	2.00e-74	271.00
IUUC-Sly-111500	Solanum lycopersicum	51.44	1.00e-72	265.00
IUUC-Tca-121342	Theobroma cacao	61.41	1.00e-86	311.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence