iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099629

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_762495; POPTR_0006s10050g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s10050	POPTR_0006s10050.1	POPTR_0006s10050.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.00e-06	28.4	149	187

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+e  ++ +++  C+H+++++C   w        ++++CP Cr
   Q: 149  CGICMEINSR-VVLPKCNHAMCLKCYRDW------RARSQSCPFCR 187
           9*****9999.88777*************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MKREMRKSFK DSLKALEADI QFANTLASVY PREYDGACLQ MRLSYSPAAH LFLFLVQWTG 60
FHLAGALGLL RILIYKAYED GKTTMSIHER KASVREFYGV IFPSLLQLQR GITDVEDRKQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAGCGAAAA GCCCAACGCA GTAGCCCTCA CTCTTCTTTC TGCTCCTTTA TTCTCTCTCT 60
CTCTCGCCCT CTCTACCTGC CTCAGTCTCA TAATTGTTCT TATTTTTATT GTTTTGGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

pop:POPTR_0006s10050g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006206	Arabidopsis lyrata	76.45	1.00e-109	388.00
IUUC-Ath-006779	Arabidopsis thaliana	77.69	1.00e-104	371.00
IUUC-Bol-015906	Brassica oleracea	74.38	2.00e-105	374.00
IUUC-Bra-017421	Brassica rapa	73.97	9.00e-105	372.00
IUUC-Gma-043685	Glycine max	76.13	1.00e-110	391.00
IUUC-Ppe-101294	Prunus persica	84.94	3.00e-113	400.00
IUUC-Tca-121511	Theobroma cacao	85.36	7.00e-114	402.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence