iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017653

Ensembl Protein ID

Bra005724.1-P

UniProt Accession

M4CND6; M4CND6_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra005724	Bra005724.1	Bra005724.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-27	95.9	489	526
UBD/Beta-Prp	1.30e-40	140.5	477	700

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           gH d+v +l++  + ll+s+s D+t+++WD+ ++ +lk
   Q: 489  GHLDDVLDLSWsRSQLLLSSSKDKTVRLWDIESQSCLK 526
           8**********8449****************9999986 PP

UBD/Beta-Prp

   S: 37   wdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqclee 131
           +++++ k + s+ gh + v ++++s+++ +l+++s+D+t+++wd+++ +c+  +  h+d+v++++f+p + d+++sGs d  ir+w+++++q++e 
   Q: 477  FSLSD-KPICSFTGHLDDVLDLSWSRSQ-LLLSSSKDKTVRLWDIESQSCLKLFA-HNDYVTCVQFNPlDEDYFISGSLDAKIRIWNISNRQVVE- 568
           55555.4456788888889999999887.89999999999999999999988888.999999999999666999999999999999999999997. PP
   S: 132  tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl.......tgghtdsvyslsfdsng.kelvsgsldgtvklwdlqtgecvrtln 219
             +  +++v+ v++  dg+  + Gs  + +rl++ +  kl +t        ++++ ++++  +f++    e++  s d+++++ d   +e v++++
   Q: 569  -WTDLNEMVTAVCYTRDGQAAFVGSHKGNCRLYSAEDCKLEQTNhidlqnkKKAQAKKITAFQFSPINpAEVLVTSADSRIRVLDG--TELVQKFR 661
           .6777778889999998888888999999999988888888888888888866788888888888855588888888999999887..55688888 PP
   S: 220  ghtdnvksvrfs..pnderlvsgssDgsiriWdlrsgdllk 258
           g +++ +++ +s   + +++v++s+D ++++W  ++ ++  
   Q: 662  GFKNTCSQMTASytVDAKHIVCASEDSQVYMW--KHEEPRV 700
           88888888888877888899999999999998..5555554 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MANQCGASGK LERKKTMAMN WAGLGEVEDD DDRFFESSNR ISTVVPIDLA SSSDEEEGEF 60
DDCRISFSSS AARHAPEPVT SPDFDIWMSA PGSITERRRR LRDGMGLESK KSMLGSISIQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGAATC AATGCGGCGC AAGTGGGAAA CTGGAACGGA AGAAGACAAT GGCGATGAAC 60
TGGGCGGGGT TAGGCGAGGT TGAAGACGAC GACGACCGCT TCTTCGAGAG CTCTAACCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006449	Arabidopsis lyrata	78.34	0.00e+00	1197.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence