iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bdi-015033

Ensembl Protein ID

BRADI2G62140.1

UniProt Accession

I1HVN4; I1HVN4_BRADI

Protein Name

Uncharacterized protein

Gene Name

LOC100839910

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI2G62140	BRADI2G62140.1	BRADI2G62140.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-24	85.9	289	323
E3 adaptor/Cullin RING/APC_C/CDC20	3.30e-143	477.0	155	456

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           gH ++v++l++ +d + l+sG++D+++ vW+ r++
   Q: 289  GHRSEVCGLKWsHDdRELASGGNDNQLLVWNQRSQ 323
           8***********55599**************8776 PP

E3 adaptor/Cullin RING/APC_C/CDC20

   S: 1    pekvldapelrddfylnLldWssknvlavaLgssvylwsaktgdvskladleekdlvtsvswieegtllavGtkkgeveiyDveekkkvrtltgh 95
           p kvldap+l+ddfylnL+dWss+n+lav+Lg++vylwsa++++v+kl+dl ++d+v++v+w++eg++lavGt +g v+i+D +++k++r++ gh
   Q: 155  PRKVLDAPSLQDDFYLNLVDWSSQNMLAVGLGTCVYLWSASSSKVTKLCDLGPRDTVCAVHWTREGSYLAVGTGHGDVQIWDSSRCKRIRNMGGH 249
           679******************************************************************************************** PP
   S: 96   sarvgaLsWnaevlssGsrdgeilhrdvrvkelklstlqahaqevCGlkwnedaklLasGGnDnsvsvwdasssePlkkfkehkaavkaiawsPw 190
           +ar + L+Wn+++lssGsrd++il++d+rv++  +s++++h++evCGlkw++d+++LasGGnDn++ vw+++s++P+ + +eh+aavkaiawsP+
   Q: 250  QARASVLAWNSTILSSGSRDKSILQHDIRVPNDYISKFSGHRSEVCGLKWSHDDRELASGGNDNQLLVWNQRSQQPVLRLTEHTAAVKAIAWSPH 344
           *********************************************************************************************** PP
   S: 191  qkslLasGGGtaDrcikfwntltgalleeidtgsqvcsllwskkskelvsthGfaenkitlwkypslskvaelkgheaRvlslalspdgeaivta 285
           q++l+asGGGtaDrcikfwnt++g++l+++dtgsqvc+l+w k+ +elvsthG+++n+i++wkyps+skva+l+gh++Rvl+la+spdg++ivt+
   Q: 345  QHGLVASGGGTADRCIKFWNTANGNMLNSVDTGSQVCNLAWCKNVNELVSTHGYSQNQIMVWKYPSMSKVATLTGHTLRVLYLAMSPDGQTIVTG 439
           *********************************************************************************************** PP
   S: 286  agDetlrfwklfdkkka 302
           agDetlrfw++f + k+
   Q: 440  AGDETLRFWNIFPSMKT 456
           ************87665 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MAATEAKPRL NVPAAMAGAL RLDPSGTASP SRSASSSSSR LLEIPKTPSP SKTTYSDRFI 60
PCRSSSRLHN FALIDPPSSP AAAPDTPYSR LLRAELFPDS TPTSDAAAAG PDSPNTNLFR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCGA CGGAGGCGAA GCCGCGGCTG AACGTGCCGG CGGCGATGGC GGGGGCGCTG 60
CGGCTGGACC CGTCCGGCAC CGCCTCCCCG TCCCGCTCCG CCTCCTCGTC GTCCTCCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR033010--Cdc20/Fizzy
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097027--F:ubiquitin-protein transferase activator activity
GO:1904668--P:positive regulation of ubiquitin protein ligase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003035	Amborella trichopoda	72.05	0.00e+00	645.00
IUUC-Aly-006009	Arabidopsis lyrata	69.43	2.00e-176	610.00
IUUC-Ath-007167	Arabidopsis thaliana	69.20	5.00e-174	603.00
IUUC-Bol-016159	Brassica oleracea	64.43	1.00e-173	601.00
IUUC-Bra-017745	Brassica rapa	63.89	1.00e-172	598.00
IUUC-Cre-022944	Chlamydomonas reinhardtii	44.28	1.00e-96	345.00
IUUC-Gma-043563	Glycine max	65.57	6.00e-176	609.00
IUUC-Hvu-047486	Hordeum vulgare	94.58	1.00e-169	587.00
IUUC-Kpa-049239	Komagataella pastoris	61.72	4.00e-116	410.00
IUUC-Lpe-051568	Leersia perrieri	75.27	0.00e+00	650.00
IUUC-Mtr-057760	Medicago truncatula	71.56	6.00e-179	619.00
IUUC-Mac-064942	Musa acuminata	75.74	0.00e+00	673.00
IUUC-Oba-075417	Oryza barthii	84.37	7.00e-175	606.00
IUUC-Obr-076033	Oryza brachyantha	83.48	0.00e+00	723.00
IUUC-Ogl-077441	Oryza glaberrima	80.71	0.00e+00	738.00
IUUC-Ogu-078877	Oryza glumaepatula	77.13	0.00e+00	705.00
IUUC-Oin-079461	Oryza indica	77.97	0.00e+00	688.00
IUUC-Olo-080716	Oryza longistaminata	77.36	0.00e+00	663.00
IUUC-Ome-081663	Oryza meridionalis	78.81	0.00e+00	706.00
IUUC-Oni-083097	Oryza nivara	78.01	0.00e+00	701.00
IUUC-Opu-083464	Oryza punctata	78.38	0.00e+00	706.00
IUUC-Oru-084848	Oryza rufipogon	78.01	0.00e+00	701.00
IUUC-Osa-085451	Oryza sativa	80.71	0.00e+00	738.00
IUUC-Pma-094581	Petromyzon marinus	65.16	9.00e-116	409.00
IUUC-Pop-099953	Populus trichocarpa	69.84	3.00e-175	607.00
IUUC-Ppe-101285	Prunus persica	66.53	8.00e-174	602.00
IUUC-Sja-107900	Schizosaccharomyces japonicus	58.19	2.00e-108	385.00
IUUC-Sit-110550	Setaria italica	80.75	0.00e+00	753.00
IUUC-Sly-111395	Solanum lycopersicum	67.95	3.00e-176	610.00
IUUC-Stu-112356	Solanum tuberosum	68.41	1.00e-176	611.00
IUUC-Sbi-114386	Sorghum bicolor	75.75	0.00e+00	717.00
IUUC-Sre-115222	Sporisorium reilianum	62.54	3.00e-118	417.00
IUUC-Tsy-118931	Tarsius syrichta	37.50	2.00e-58	219.00
IUUC-Tca-121682	Theobroma cacao	71.29	3.00e-179	620.00
IUUC-Tae-123028	Triticum aestivum	81.93	0.00e+00	729.00
IUUC-Tur-126545	Triticum urartu	85.08	6.00e-154	536.00
IUUC-Uma-129555	Ustilago maydis	62.22	7.00e-118	417.00
IUUC-Vvi-131748	Vitis vinifera	67.71	0.00e+00	630.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence