iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007679

UUCD1 version

UUC-ArT-00959

Ensembl Protein ID

AT5G15790.4

UniProt Accession

Q9LFU7; Q9LFU7_ARATH

Genbank Protein ID

AAM98197.1; AAP13378.1; AED92205.1; AED92206.1; ANM69838.1; ANM69840.1; BAF01020.1; CAC01778.1

Protein Name

At5g15790; Putative uncharacterized protein; Putative uncharacterized protein At5g15790; Putative uncharacterized protein F14F8_170; RING/U-box superfamily protein

Genbank Nucleotide ID

AY140056; BT006270; CP002688; CP002688; CP002688; CP002688; AK229146; AL391144

Gene Name

At5g15790; F14F8.170; F14F8_170

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G15790	AT5G15790.2	AT5G15790.2
AT5G15790	AT5G15790.4	AT5G15790.4

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
iRefIndex	PINA	HINT	Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.60e-08	33.6	182	222

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C++Cle++  +++ +v+ C H+fh++C++ w        ++ +CP+C
   Q: 182  CPTCLEEYisENPKIVTKCSHHFHLSCIYEW------MERSENCPVC 222
           ******998777556799*************......999999**** PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MGCVSSCFGV DDFEDYPNPS SSVNRSCPCP RCLVNNFLNL YISLFRRGET RSLPSSLQAT 60
NVSIATSTSY DNFMSNTFHS TPRPLPYDAD PRYFRSRRDS LVSRRDKGSS HSHEEAEPLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGAGTCCTC CATTAGCGTC CAGCAACAAC GCCCACCCAC TTTCACACCA ACTTGAACAC 60
ACTACTCCTC CTCCTTCACT TTTTCCTTCA ATCTCTCTTC TCGCTGACGA CTTGGAAATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000479	Aegilops tauschii	44.62	5.00e-33	132.00
IUUC-Atr-003101	Amborella trichopoda	51.08	1.00e-49	188.00
IUUC-Aly-005799	Arabidopsis lyrata	90.99	3.00e-116	409.00
IUUC-Bol-015279	Brassica oleracea	77.22	8.00e-99	352.00
IUUC-Bra-017206	Brassica rapa	78.11	3.00e-98	350.00
IUUC-Cre-022854	Chlamydomonas reinhardtii	59.18	2.00e-17	79.30
IUUC-Hvu-047238	Hordeum vulgare	45.45	1.00e-46	178.00
IUUC-Lpe-051120	Leersia perrieri	45.89	7.00e-40	158.00
IUUC-Mtr-058320	Medicago truncatula	57.46	9.00e-71	258.00
IUUC-Obr-076815	Oryza brachyantha	45.06	6.00e-44	170.00
IUUC-Ogl-076952	Oryza glaberrima	42.31	3.00e-46	177.00
IUUC-Ogu-078357	Oryza glumaepatula	46.34	4.00e-39	153.00
IUUC-Oin-079155	Oryza indica	42.31	3.00e-46	177.00
IUUC-Olo-080533	Oryza longistaminata	46.63	1.00e-36	147.00
IUUC-Ome-081642	Oryza meridionalis	42.92	4.00e-46	176.00
IUUC-Oni-082343	Oryza nivara	43.91	1.00e-43	169.00
IUUC-Opu-083596	Oryza punctata	43.43	2.00e-42	165.00
IUUC-Oru-084659	Oryza rufipogon	43.72	9.00e-44	169.00
IUUC-Osa-085985	Oryza sativa	42.31	3.00e-46	177.00
IUUC-Pop-099578	Populus trichocarpa	58.52	2.00e-63	234.00
IUUC-Ppe-101573	Prunus persica	60.09	1.00e-74	271.00
IUUC-Sly-111198	Solanum lycopersicum	55.79	1.00e-63	234.00
IUUC-Stu-112362	Solanum tuberosum	44.32	6.00e-30	123.00
IUUC-Tca-121439	Theobroma cacao	56.58	3.00e-64	237.00
IUUC-Tae-124969	Triticum aestivum	45.89	3.00e-47	181.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence