iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017128

Ensembl Protein ID

Bra006415.1-P

UniProt Accession

M4CQC6; M4CQC6_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra006415	Bra006415.1	Bra006415.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.30e-08	35.4	135	177

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f  ++ +++lp C+H+fh+ C+  w       + + +CPlCr
   Q: 135  CSVCLSEFeeDESLRLLPkCNHAFHLPCIDTW------LRSHSNCPLCR 177
           ********7655599999**************......**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGSMSNPNPW SPYDSYNDCS QGVCNIYCPQ WCYLIFPPPP PSFLNDEDED SPSSFSPLLI 60
ALIVTLVTAF ILVSYYTLVS KYCRRPSRET SSDGRNITES NSNAVAGDGL NDALIKSITV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTTCAA TGTCAAACCC CAACCCATGG TCTCCATACG ACTCCTACAA CGACTGCTCT 60
CAAGGAGTCT GCAACATCTA CTGCCCGCAA TGGTGCTACC TAATCTTCCC TCCTCCTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006272	Arabidopsis lyrata	59.56	5.00e-97	347.00
IUUC-Ath-006705	Arabidopsis thaliana	61.05	5.00e-102	363.00
IUUC-Bdi-014160	Brachypodium distachyon	51.46	3.00e-51	195.00
IUUC-Bol-015947	Brassica oleracea	84.71	2.00e-132	464.00
IUUC-Mac-064576	Musa acuminata	52.60	2.00e-56	213.00
IUUC-Ppa-095182	Physcomitrella patens	49.65	3.00e-29	123.00
IUUC-Pop-099300	Populus trichocarpa	46.05	3.00e-79	288.00
IUUC-Ppe-101180	Prunus persica	43.01	1.00e-70	259.00
IUUC-Sly-111110	Solanum lycopersicum	43.64	2.00e-55	208.00
IUUC-Stu-112087	Solanum tuberosum	45.66	2.00e-54	205.00
IUUC-Tca-120979	Theobroma cacao	46.38	9.00e-85	306.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence