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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105627
UUCD1 version UUC-RaN-00670
Ensembl Protein ID ENSRNOP00000046140.4
UniProt Accession Q498M7; F1MAD6; Q498M7_RAT
Genbank Protein ID AAI00153.1
Protein Name CCR4-NOT transcription complex, subunit 4
Genbank Nucleotide ID AABR07060209
Gene Name Cnot4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000010795.6 ENSRNOT00000040969.4 ENSRNOP00000046140.4
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
microRNARAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAFPhosphositePlus
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
E3 activity/RING/RING 44.90 3.00e-55 211.00 IUUC-Sce-106312
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MSRSPDAKED PVECPLCMEP LEIDDINFFP CTCGYQICRF CWHRIRTDEN GLCPACRKPY 60
PEDPAVYKPL SQEELQRIKN EKKQKQNERK QKISENRKHL ASVRVVQKNL VFVVGLSQRL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105627|E3,RING|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AGATGGTGGC CCGTCTAGCC GTGGAACCCA CCGAAAGCTG AGAGTCTCTC TCTCAGCCGT 60
AAAGGTCGGA CTCACTGAAG CAGTCAGGCC CGGTTCTGAA GAGTTTTTTC GCCGACTCTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105627|E3,RING|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0694--RNA-binding
KW-0862--Zinc
KW-0863--Zinc-finger
Interpro

IPR034261--CNOT4_RRM
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR003954--RRM_dom_euk
IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
PROSITE

PS50102--RRM
PS50103--ZF_C3H1
PS50089--ZF_RING_2
Pfam

PF00076--RRM_1
SMART

SM00361--RRM_1
Gene Ontology

GO:0030014--C:CCR4-NOT complex
GO:0000166--F:nucleotide binding
GO:0003723--F:RNA binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0051865--P:protein autoubiquitination
KEGG rno:312227
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000464 Aegilops tauschii 42.48 3.00e-54 207.00
IUUC-Aml-002384 Ailuropoda melanoleuca 96.88 0.00e+00 1228.00
IUUC-Atr-002462 Amborella trichopoda 46.64 4.00e-61 230.00
IUUC-Apl-003756 Anas platyrhynchos 87.66 0.00e+00 1228.00
IUUC-Aca-004643 Anolis carolinensis 87.66 0.00e+00 1207.00
IUUC-Aly-006093 Arabidopsis lyrata 39.76 4.00e-55 209.00
IUUC-Ath-007371 Arabidopsis thaliana 41.73 1.00e-54 208.00
IUUC-Ago-007799 Ashbya gossypii 49.36 7.00e-57 215.00
IUUC-Acl-008077 Aspergillus clavatus 39.21 3.00e-41 164.00
IUUC-Afl-008720 Aspergillus flavus 40.09 9.00e-46 179.00
IUUC-Afu-008905 Aspergillus fumigatus 40.00 2.00e-42 168.00
IUUC-Ani-009264 Aspergillus nidulans 40.44 4.00e-27 116.00
IUUC-Ang-009537 Aspergillus niger 40.09 4.00e-45 177.00
IUUC-Aor-010123 Aspergillus oryzae 35.68 3.00e-28 121.00
IUUC-Ate-010409 Aspergillus terreus 40.97 1.00e-45 179.00
IUUC-Ame-011538 Astyanax mexicanus 96.05 5.00e-131 461.00
IUUC-Bgr-012062 Blumeria graminis 43.59 1.00e-54 209.00
IUUC-Bta-012419 Bos taurus 89.64 0.00e+00 1019.00
IUUC-Bci-013633 Botrytis cinerea 43.35 6.00e-54 206.00
IUUC-Bdi-014913 Brachypodium distachyon 43.81 2.00e-54 208.00
IUUC-Bol-016407 Brassica oleracea 44.80 2.00e-57 217.00
IUUC-Bra-017755 Brassica rapa 45.25 9.00e-58 218.00
IUUC-Cel-018123 Caenorhabditis elegans 59.66 2.00e-85 310.00
IUUC-Cja-019705 Callithrix jacchus 97.89 0.00e+00 1278.00
IUUC-Cfa-020440 Canis familiaris 97.89 0.00e+00 1284.00
IUUC-Cpo-022091 Cavia porcellus 94.62 0.00e+00 1002.00
IUUC-Cre-022872 Chlamydomonas reinhardtii 35.71 4.00e-12 65.90
IUUC-Csa-024202 Chlorocebus sabaeus 97.89 0.00e+00 1256.00
IUUC-Cho-024410 Choloepus hoffmanni 93.90 5.00e-151 528.00
IUUC-Cin-025558 Ciona intestinalis 70.04 2.00e-112 400.00
IUUC-Cgl-026687 Colletotrichum gloeosporioides 45.57 4.00e-56 213.00
IUUC-Cne-027084 Cryptococcus neoformans 37.75 1.00e-44 174.00
IUUC-Cme-027148 Cyanidioschyzon merolae 29.95 4.00e-22 100.00
IUUC-Dre-028377 Danio rerio 96.03 6.00e-130 458.00
IUUC-Dno-029100 Dasypus novemcinctus 95.51 0.00e+00 1273.00
IUUC-Dor-030310 Dipodomys ordii 98.25 5.00e-121 428.00
IUUC-Dse-031514 Dothistroma septosporum 42.51 5.00e-49 189.00
IUUC-Dme-031735 Drosophila melanogaster 73.47 3.00e-107 383.00
IUUC-Ete-033091 Echinops telfairi 93.90 0.00e+00 1175.00
IUUC-Eca-033506 Equus caballus 97.05 0.00e+00 1249.00
IUUC-Eeu-034506 Erinaceus europaeus 90.96 0.00e+00 939.00
IUUC-Fca-036033 Felis catus 99.07 0.00e+00 1038.00
IUUC-Fal-037540 Ficedula albicollis 87.80 0.00e+00 1262.00
IUUC-Fox-037944 Fusarium oxysporum 46.29 2.00e-58 220.00
IUUC-Fso-038172 Fusarium solani 42.55 2.00e-47 185.00
IUUC-Gmo-039211 Gadus morhua 86.67 4.00e-128 452.00
IUUC-Ggr-040096 Gaeumannomyces graminis 47.68 3.00e-61 231.00
IUUC-Gga-040487 Gallus gallus 87.66 0.00e+00 1241.00
IUUC-Gac-042294 Gasterosteus aculeatus 90.19 8.00e-128 451.00
IUUC-Gma-043229 Glycine max 45.11 3.00e-56 214.00
IUUC-Ggo-044950 Gorilla gorilla 96.81 0.00e+00 1121.00
IUUC-Hsa-046666 Homo sapiens 97.97 0.00e+00 1006.00
IUUC-Hvu-047405 Hordeum vulgare 42.92 3.00e-54 207.00
IUUC-Itr-047888 Ictidomys tridecemlineatus 100.00 1.00e-152 531.00
IUUC-Kpa-049260 Komagataella pastoris 47.03 9.00e-55 208.00
IUUC-Lch-050203 Latimeria chalumnae 80.92 0.00e+00 1115.00
IUUC-Lpe-051195 Leersia perrieri 43.67 2.00e-53 204.00
IUUC-Loc-052886 Lepisosteus oculatus 76.07 0.00e+00 1031.00
IUUC-Lma-053073 Leptosphaeria maculans 43.67 3.00e-52 200.00
IUUC-Laf-053490 Loxodonta africana 96.35 0.00e+00 1241.00
IUUC-Mcc-055724 Macaca mulatta 97.34 0.00e+00 1249.00
IUUC-Meu-056787 Macropus eugenii 83.16 0.00e+00 985.00
IUUC-Mor-056921 Magnaporthe oryzae 47.01 2.00e-59 223.00
IUUC-Mpo-057616 Magnaporthe poae 47.26 3.00e-60 226.00
IUUC-Mtr-058426 Medicago truncatula 43.35 6.00e-53 202.00
IUUC-Mla-059146 Melampsora laricipopulina 41.70 5.00e-46 179.00
IUUC-Mga-059372 Meleagris gallopavo 87.53 0.00e+00 1221.00
IUUC-Mvi-060479 Microbotryum violaceum 36.04 3.00e-31 130.00
IUUC-Mmr-061012 Microcebus murinus 97.62 0.00e+00 1274.00
IUUC-Mdo-062330 Monodelphis domestica 95.92 0.00e+00 1234.00
IUUC-Mmu-063894 Mus musculus 99.01 0.00e+00 1268.00
IUUC-Mac-064805 Musa acuminata 45.33 1.00e-57 217.00
IUUC-Mpu-066894 Mustela putorius furo 97.89 0.00e+00 1284.00
IUUC-Mlu-067321 Myotis lucifugus 98.32 0.00e+00 1015.00
IUUC-Nfi-068451 Neosartorya fischeri 39.65 2.00e-42 168.00
IUUC-Ncr-068667 Neurospora crassa 45.85 8.00e-53 203.00
IUUC-Nle-070058 Nomascus leucogenys 97.05 0.00e+00 1214.00
IUUC-Opr-071108 Ochotona princeps 95.78 0.00e+00 647.00
IUUC-Ont-071541 Oreochromis niloticus 90.57 2.00e-128 453.00
IUUC-Oan-073232 Ornithorhynchus anatinus 94.24 0.00e+00 1210.00
IUUC-Ocu-074893 Oryctolagus cuniculus 97.75 0.00e+00 1251.00
IUUC-Oba-075623 Oryza barthii 39.38 3.00e-28 119.00
IUUC-Obr-076653 Oryza brachyantha 43.36 1.00e-55 211.00
IUUC-Ogl-077946 Oryza glaberrima 43.07 9.00e-45 172.00
IUUC-Ogu-078775 Oryza glumaepatula 44.05 2.00e-53 202.00
IUUC-Oin-079214 Oryza indica 44.05 2.00e-55 211.00
IUUC-Olo-080799 Oryza longistaminata 32.74 2.00e-29 122.00
IUUC-Ome-081843 Oryza meridionalis 40.83 2.00e-52 200.00
IUUC-Oni-082944 Oryza nivara 39.38 1.00e-29 122.00
IUUC-Opu-083668 Oryza punctata 43.61 2.00e-55 211.00
IUUC-Oru-084249 Oryza rufipogon 35.29 2.00e-35 144.00
IUUC-Osa-086233 Oryza sativa 44.05 1.00e-55 212.00
IUUC-Ola-087121 Oryzias latipes 90.94 6.00e-129 454.00
IUUC-Olu-087772 Ostreococcus lucimarinus 42.11 9.00e-41 159.00
IUUC-Oga-088556 Otolemur garnettii 97.19 0.00e+00 1270.00
IUUC-Oar-089768 Ovis aries 96.91 0.00e+00 1235.00
IUUC-Ptr-090585 Pan troglodytes 96.91 0.00e+00 1246.00
IUUC-Pan-092625 Papio anubis 97.75 0.00e+00 1254.00
IUUC-Psi-093462 Pelodiscus sinensis 86.37 0.00e+00 1165.00
IUUC-Pma-094468 Petromyzon marinus 86.75 4.00e-124 439.00
IUUC-Pno-094812 Phaeosphaeria nodorum 40.45 4.00e-29 124.00
IUUC-Ppa-095589 Physcomitrella patens 51.79 7.00e-15 75.10
IUUC-Pfo-096762 Poecilia formosa 90.57 6.00e-128 451.00
IUUC-Pab-097890 Pongo abelii 97.61 0.00e+00 1251.00
IUUC-Pop-099764 Populus trichocarpa 43.59 6.00e-59 223.00
IUUC-Pca-101121 Procavia capensis 92.51 0.00e+00 1049.00
IUUC-Ppe-102076 Prunus persica 42.75 4.00e-56 213.00
IUUC-Pva-102489 Pteropus vampyrus 94.49 0.00e+00 1176.00
IUUC-Pgr-103568 Puccinia graminis 41.70 1.00e-48 188.00
IUUC-Ptt-103721 Puccinia triticina 37.08 6.00e-30 126.00
IUUC-Pte-104118 Pyrenophora teres 42.98 2.00e-54 207.00
IUUC-Pyt-104612 Pyrenophora triticirepentis 42.98 1.00e-54 207.00
IUUC-Sce-106312 Saccharomyces cerevisiae 44.90 1.00e-54 207.00
IUUC-Sha-106619 Sarcophilus harrisii 95.77 0.00e+00 1236.00
IUUC-Sja-107765 Schizosaccharomyces japonicus 50.65 2.00e-56 213.00
IUUC-Spo-108328 Schizosaccharomyces pombe 51.29 6.00e-62 231.00
IUUC-Ssl-108577 Sclerotinia sclerotiorum 44.54 7.00e-51 195.00
IUUC-Smo-108760 Selaginella moellendorffii 44.21 2.00e-55 208.00
IUUC-Sit-109923 Setaria italica 40.68 1.00e-52 202.00
IUUC-Sly-110900 Solanum lycopersicum 39.15 1.00e-50 194.00
IUUC-Stu-112226 Solanum tuberosum 39.15 2.00e-50 194.00
IUUC-Sar-113620 Sorex araneus 98.14 0.00e+00 714.00
IUUC-Sbi-114318 Sorghum bicolor 40.95 3.00e-54 207.00
IUUC-Sre-114956 Sporisorium reilianum 47.74 2.00e-65 244.00
IUUC-Ssc-116116 Sus scrofa 100.00 6.00e-152 529.00
IUUC-Tgu-117357 Taeniopygia guttata 87.93 0.00e+00 1249.00
IUUC-Tru-118759 Takifugu rubripes 81.64 1.00e-133 470.00
IUUC-Tsy-119387 Tarsius syrichta 92.83 0.00e+00 1149.00
IUUC-Tni-120536 Tetraodon nigroviridis 68.15 0.00e+00 847.00
IUUC-Tca-121035 Theobroma cacao 45.74 1.00e-57 218.00
IUUC-Tre-121996 Trichoderma reesei 42.98 2.00e-47 185.00
IUUC-Tvi-122371 Trichoderma virens 44.26 2.00e-54 208.00
IUUC-Tae-124373 Triticum aestivum 42.92 4.00e-54 206.00
IUUC-Tur-126324 Triticum urartu 42.92 2.00e-54 207.00
IUUC-Tme-127072 Tuber melanosporum 40.00 1.00e-42 169.00
IUUC-Tbe-128107 Tupaia belangeri 91.03 0.00e+00 1125.00
IUUC-Ttr-128846 Tursiops truncatus 95.84 0.00e+00 1200.00
IUUC-Uma-129607 Ustilago maydis 47.74 2.00e-65 244.00
IUUC-Vda-129971 Verticillium dahliae 42.86 2.00e-47 184.00
IUUC-Vpa-130298 Vicugna pacos 91.88 0.00e+00 941.00
IUUC-Vvi-131651 Vitis vinifera 45.74 2.00e-58 221.00
IUUC-Xtr-132728 Xenopus tropicalis 98.52 5.00e-150 524.00
IUUC-Xma-133789 Xiphophorus maculatus 90.57 9.00e-128 451.00
IUUC-Yli-134461 Yarrowia lipolytica 42.22 2.00e-47 183.00
IUUC-Zma-135031 Zea mays 42.37 1.00e-54 207.00
Created Date 25-Jun-2017

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