iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099167

Ensembl Protein ID

POPTR_0003s20150.1

UniProt Accession

B9GWK1; B9GWK1_POPTR

Genbank Protein ID

EEE79755.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000339

Gene Name

XM_002304740.1; POPTR_0003s20150g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s20150	POPTR_0003s20150.1	POPTR_0003s20150.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-20	73.4	173	208

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           H+ds++cl   + +l+ sGs+D+t+kvW++++ ++l 
   Q: 173  HADSISCLTVyN-GLIYSGSWDKTLKVWRISDLKCLE 208
           9*******9646.9****************9999986 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDLFVSEITT PSTPLLFAAA TSTIGMSTSS SSSICSSEDS PATSFRFELQ DVGPLAVLSG 60
HVGSVSCLAL CGEFILSASQ GKDIIVWQQP DLRMFTKFGQ GDGSVKALVT VGSKVFTAHQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCTTT TTGTGTCAGA AATCACCACT CCTTCAACCC CATTACTGTT TGCAGCAGCT 60
ACAAGTACCA TTGGCATGAG TACTAGTAGC AGCAGCAGTA TTTGCAGCAG TGAAGATAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0003s20150g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002847	Amborella trichopoda	71.57	2.00e-132	464.00
IUUC-Ath-006729	Arabidopsis thaliana	75.70	5.00e-151	526.00
IUUC-Bol-015324	Brassica oleracea	75.69	5.00e-145	506.00
IUUC-Bra-017666	Brassica rapa	73.11	9.00e-145	506.00
IUUC-Gma-043773	Glycine max	82.09	6.00e-163	566.00
IUUC-Hvu-047162	Hordeum vulgare	53.79	1.00e-76	278.00
IUUC-Mac-064928	Musa acuminata	67.27	8.00e-115	406.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence