iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112315

Ensembl Protein ID

PGSC0003DMT400017340

UniProt Accession

M1A8T9; M1A8T9_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400006751	PGSC0003DMT400017340	PGSC0003DMT400017340

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.60e-20	71.4	185	220

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    HtdsvtclafsdtllvsGsdDgtikvWDlrtgvllk 37
           H+ds++cla s++++ sGs+D+++kvW++++ ++l 
   Q: 185  HADSISCLAVSNGYIYSGSWDKSLKVWRISDLKCLE 220
           9*********66*****************9999986 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MASPAYTTPL LSESSNSIIS TTSSSRSSSE SEESPETSQR FQDFQLLDLQ LKISRTPISC 60
FHSYKSLAVL SGHVGTVSCL ALCGEFILSA SQGKDIIVWQ QPDLRQFTKF GTGDGSVKAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATAACGTCTC TTTTATAAAA TCTCACCATT TCGGTTTTTT ATTAAAAACT CCATCTTTTT 60
ACTATTCCTC TCTCACCATC TTCTTCTTCT TCATCTCTCT CTGTTTCATA TACAAAAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002847	Amborella trichopoda	70.66	2.00e-133	468.00
IUUC-Aly-005620	Arabidopsis lyrata	71.39	2.00e-142	497.00
IUUC-Ath-006729	Arabidopsis thaliana	70.74	5.00e-140	489.00
IUUC-Bdi-014229	Brachypodium distachyon	54.78	2.00e-99	354.00
IUUC-Bol-015324	Brassica oleracea	68.25	6.00e-136	476.00
IUUC-Bra-017666	Brassica rapa	68.62	3.00e-135	473.00
IUUC-Gma-043773	Glycine max	77.37	1.00e-151	528.00
IUUC-Hvu-047162	Hordeum vulgare	55.52	2.00e-77	281.00
IUUC-Lpe-050845	Leersia perrieri	54.52	4.00e-91	327.00
IUUC-Mtr-058525	Medicago truncatula	76.79	1.00e-148	518.00
IUUC-Mac-064928	Musa acuminata	66.47	5.00e-115	406.00
IUUC-Oba-075989	Oryza barthii	58.99	3.00e-112	397.00
IUUC-Obr-076522	Oryza brachyantha	58.97	2.00e-113	401.00
IUUC-Ogl-077747	Oryza glaberrima	57.89	1.00e-110	392.00
IUUC-Ogu-078306	Oryza glumaepatula	59.71	4.00e-110	390.00
IUUC-Oin-079397	Oryza indica	59.71	4.00e-110	390.00
IUUC-Olo-080627	Oryza longistaminata	61.16	2.00e-76	278.00
IUUC-Ome-081295	Oryza meridionalis	59.13	3.00e-109	387.00
IUUC-Oni-082259	Oryza nivara	57.89	1.00e-110	392.00
IUUC-Opu-083686	Oryza punctata	60.59	4.00e-112	397.00
IUUC-Oru-084598	Oryza rufipogon	59.71	4.00e-110	390.00
IUUC-Osa-085705	Oryza sativa	57.89	2.00e-106	377.00
IUUC-Ppa-095765	Physcomitrella patens	41.72	9.00e-75	272.00
IUUC-Pop-099519	Populus trichocarpa	79.10	1.00e-161	561.00
IUUC-Ppe-101179	Prunus persica	77.66	1.00e-161	561.00
IUUC-Smo-108708	Selaginella moellendorffii	38.44	7.00e-47	179.00
IUUC-Sit-109966	Setaria italica	61.45	2.00e-108	384.00
IUUC-Sly-111222	Solanum lycopersicum	91.02	0.00e+00	668.00
IUUC-Sbi-114323	Sorghum bicolor	56.20	2.00e-103	367.00
IUUC-Tca-121448	Theobroma cacao	77.38	4.00e-160	556.00
IUUC-Tae-123485	Triticum aestivum	57.46	9.00e-108	382.00
IUUC-Vvi-131470	Vitis vinifera	77.17	3.00e-167	580.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence