iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005837

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348717

Gene Name

ARALYDRAFT_907529

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_503233.1	scaffold_503233.1	scaffold_503233.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.20e-08	33.3	165	206

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+edf   +  + lpC H++h dC+  w       s + +CPlCr
   Q: 165  CAVCKEDFvvGESARRLPCSHIYHSDCIVPW------LSDHNSCPLCR 206
           ********99555889***************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MSSSTTTTTT VHGEPERRTY WCHECDMSLS LLSSSDSSPL LCPQCRLDFL ERMDHDSSSS 60
NLFDVTIGDF EEDDGDNDDE DDEEDWCFVD PAVNSDDNFL LDSPYLHRLL RHLASDNSGS 120

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Nucleotide Sequence
(Fasta)

ACCACAACCA CCACTTCTCA ATGTCCTCTT CCACCACCAC AACAACCACC GTCCACGGCG 60
AGCCTGAACG ACGAACTTAC TGGTGTCATG AATGCGATAT GAGTTTATCC CTCCTCTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_907529

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007519	Arabidopsis thaliana	92.23	1.00e-104	372.00
IUUC-Bol-016348	Brassica oleracea	78.65	2.00e-80	291.00
IUUC-Bra-017044	Brassica rapa	73.21	3.00e-71	261.00
IUUC-Gma-043302	Glycine max	39.42	3.00e-17	80.90
IUUC-Pop-099464	Populus trichocarpa	37.56	2.00e-23	101.00
IUUC-Stu-112438	Solanum tuberosum	49.57	1.00e-26	112.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence