iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-116765

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01015689

Gene Name

NEDD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000008696.1	ENSTGUT00000009072.1	ENSTGUP00000008975.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-22	77.9	81	108

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrt 32
           tc+++ s+  +lvsG+ D+t+ +WDl++
   Q: 81   TCVSLnSSsSYLVSGGLDNTVNIWDLKS 108
           7999995559***************987 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

MQEGIRFASS GDDIKIWDSS SFTVVEQFNP HTPSHPVSSL CWASNNRYLA TASAAGDKII 60
VSSCKSKPVP LFEIAEGAKQ TCVSLNSSSS YLVSGGLDNT VNIWDLKSRK IYRSLKEHKD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAAGAAG GCATACGTTT TGCATCATCA GGAGATGATA TTAAAATATG GGATTCCTCA 60
TCTTTTACTG TGGTGGAGCA GTTCAACCCA CATACACCGT CACATCCAGT CAGTTCACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0045177--C:apical part of cell
GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000242--C:pericentriolar material
GO:0000922--C:spindle pole

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000871	Aegilops tauschii	28.89	4.00e-18	86.70
IUUC-Aml-002397	Ailuropoda melanoleuca	62.87	0.00e+00	811.00
IUUC-Atr-002464	Amborella trichopoda	31.88	1.00e-37	151.00
IUUC-Apl-003870	Anas platyrhynchos	80.45	0.00e+00	1083.00
IUUC-Aca-004925	Anolis carolinensis	62.86	0.00e+00	819.00
IUUC-Aly-005931	Arabidopsis lyrata	31.79	2.00e-38	154.00
IUUC-Ath-006681	Arabidopsis thaliana	31.17	1.00e-37	151.00
IUUC-Ame-010906	Astyanax mexicanus	43.26	2.00e-137	482.00
IUUC-Bta-013389	Bos taurus	64.67	0.00e+00	832.00
IUUC-Bdi-014340	Brachypodium distachyon	32.19	2.00e-38	153.00
IUUC-Bol-016282	Brassica oleracea	32.72	1.00e-39	157.00
IUUC-Bra-017178	Brassica rapa	33.64	6.00e-41	162.00
IUUC-Cja-019541	Callithrix jacchus	63.95	0.00e+00	805.00
IUUC-Cfa-021218	Canis familiaris	62.99	0.00e+00	809.00
IUUC-Cpo-021697	Cavia porcellus	60.57	0.00e+00	764.00
IUUC-Csa-023620	Chlorocebus sabaeus	64.25	0.00e+00	829.00
IUUC-Cho-025105	Choloepus hoffmanni	57.98	3.00e-172	598.00
IUUC-Cin-025293	Ciona intestinalis	40.07	3.00e-60	226.00
IUUC-Csv-026234	Ciona savignyi	37.36	2.00e-50	192.00
IUUC-Dre-028251	Danio rerio	43.49	9.00e-137	480.00
IUUC-Dno-029281	Dasypus novemcinctus	57.50	3.00e-175	608.00
IUUC-Dor-031020	Dipodomys ordii	49.29	4.00e-94	338.00
IUUC-Ete-033113	Echinops telfairi	63.73	1.00e-138	486.00
IUUC-Eca-034230	Equus caballus	64.28	0.00e+00	812.00
IUUC-Eeu-034671	Erinaceus europaeus	56.80	1.00e-139	489.00
IUUC-Fca-035775	Felis catus	63.84	0.00e+00	828.00
IUUC-Fal-037557	Ficedula albicollis	90.10	0.00e+00	1151.00
IUUC-Gmo-038586	Gadus morhua	56.58	2.00e-96	345.00
IUUC-Gga-040153	Gallus gallus	79.88	0.00e+00	1090.00
IUUC-Gac-041385	Gasterosteus aculeatus	41.78	4.00e-131	461.00
IUUC-Gma-042844	Glycine max	32.12	3.00e-40	159.00
IUUC-Ggo-044576	Gorilla gorilla	64.71	0.00e+00	847.00
IUUC-Hsa-046198	Homo sapiens	64.71	0.00e+00	847.00
IUUC-Hvu-047794	Hordeum vulgare	36.61	2.00e-17	81.30
IUUC-Lch-050561	Latimeria chalumnae	50.68	2.00e-154	538.00
IUUC-Lpe-051469	Leersia perrieri	31.51	7.00e-37	148.00
IUUC-Loc-052816	Lepisosteus oculatus	48.79	1.00e-154	540.00
IUUC-Laf-053880	Loxodonta africana	61.24	0.00e+00	764.00
IUUC-Mcc-054977	Macaca mulatta	64.71	0.00e+00	835.00
IUUC-Meu-056141	Macropus eugenii	52.10	4.00e-138	484.00
IUUC-Mtr-058441	Medicago truncatula	32.35	3.00e-38	153.00
IUUC-Mga-060141	Meleagris gallopavo	78.64	0.00e+00	1058.00
IUUC-Mmr-061201	Microcebus murinus	63.69	0.00e+00	830.00
IUUC-Mdo-061855	Monodelphis domestica	61.49	0.00e+00	778.00
IUUC-Mmu-064342	Mus musculus	62.82	0.00e+00	799.00
IUUC-Mac-065368	Musa acuminata	31.07	2.00e-35	144.00
IUUC-Mpu-066191	Mustela putorius furo	63.20	0.00e+00	808.00
IUUC-Mlu-067310	Myotis lucifugus	62.33	0.00e+00	808.00
IUUC-Nle-069990	Nomascus leucogenys	64.86	0.00e+00	849.00
IUUC-Opr-070336	Ochotona princeps	59.30	0.00e+00	716.00
IUUC-Ont-071675	Oreochromis niloticus	42.94	4.00e-135	474.00
IUUC-Oan-072772	Ornithorhynchus anatinus	62.46	0.00e+00	685.00
IUUC-Ocu-074095	Oryctolagus cuniculus	65.11	0.00e+00	830.00
IUUC-Oba-075327	Oryza barthii	31.85	3.00e-38	153.00
IUUC-Obr-076119	Oryza brachyantha	32.19	9.00e-39	154.00
IUUC-Ogl-077820	Oryza glaberrima	31.51	2.00e-37	150.00
IUUC-Ogu-078679	Oryza glumaepatula	31.85	5.00e-38	152.00
IUUC-Oin-079891	Oryza indica	31.85	2.00e-38	154.00
IUUC-Olo-080414	Oryza longistaminata	34.63	2.00e-34	140.00
IUUC-Ome-081888	Oryza meridionalis	32.19	2.00e-38	154.00
IUUC-Oni-082417	Oryza nivara	31.85	3.00e-38	153.00
IUUC-Opu-083393	Oryza punctata	31.85	2.00e-38	153.00
IUUC-Oru-084698	Oryza rufipogon	31.85	2.00e-38	154.00
IUUC-Osa-086121	Oryza sativa	31.85	3.00e-38	153.00
IUUC-Ola-086806	Oryzias latipes	41.69	9.00e-141	493.00
IUUC-Olu-087591	Ostreococcus lucimarinus	24.90	1.00e-12	67.40
IUUC-Oga-088622	Otolemur garnettii	63.57	0.00e+00	833.00
IUUC-Oar-090391	Ovis aries	60.29	0.00e+00	682.00
IUUC-Ptr-091036	Pan troglodytes	64.56	0.00e+00	843.00
IUUC-Pan-092576	Papio anubis	64.71	0.00e+00	834.00
IUUC-Psi-093450	Pelodiscus sinensis	70.40	0.00e+00	922.00
IUUC-Pma-094101	Petromyzon marinus	51.32	2.00e-97	348.00
IUUC-Ppa-095636	Physcomitrella patens	32.39	2.00e-39	157.00
IUUC-Pfo-097142	Poecilia formosa	48.75	1.00e-105	376.00
IUUC-Pab-097829	Pongo abelii	64.35	0.00e+00	845.00
IUUC-Pop-099687	Populus trichocarpa	32.55	6.00e-39	155.00
IUUC-Pca-100217	Procavia capensis	61.63	2.00e-143	502.00
IUUC-Ppe-101502	Prunus persica	31.89	7.00e-39	155.00
IUUC-Pva-102736	Pteropus vampyrus	63.48	0.00e+00	829.00
IUUC-Rno-104977	Rattus norvegicus	61.50	0.00e+00	766.00
IUUC-Sha-107003	Sarcophilus harrisii	61.70	0.00e+00	786.00
IUUC-Smo-109002	Selaginella moellendorffii	32.14	7.00e-39	155.00
IUUC-Sit-109796	Setaria italica	32.35	6.00e-38	152.00
IUUC-Sly-110941	Solanum lycopersicum	31.31	1.00e-36	148.00
IUUC-Stu-112314	Solanum tuberosum	31.99	2.00e-37	150.00
IUUC-Sar-112926	Sorex araneus	58.47	0.00e+00	729.00
IUUC-Sbi-113822	Sorghum bicolor	32.93	7.00e-25	108.00
IUUC-Ssc-116242	Sus scrofa	65.95	2.00e-141	494.00
IUUC-Tru-117738	Takifugu rubripes	42.12	3.00e-148	518.00
IUUC-Tsy-118856	Tarsius syrichta	62.21	0.00e+00	745.00
IUUC-Tni-120871	Tetraodon nigroviridis	42.17	3.00e-148	518.00
IUUC-Tca-120965	Theobroma cacao	30.46	1.00e-37	151.00
IUUC-Tae-123588	Triticum aestivum	32.19	1.00e-39	158.00
IUUC-Tur-126840	Triticum urartu	32.19	9.00e-40	158.00
IUUC-Ttr-128551	Tursiops truncatus	61.02	0.00e+00	784.00
IUUC-Vpa-130324	Vicugna pacos	64.07	0.00e+00	820.00
IUUC-Vvi-131699	Vitis vinifera	30.67	3.00e-39	156.00
IUUC-Xtr-131956	Xenopus tropicalis	58.75	0.00e+00	761.00
IUUC-Xma-132982	Xiphophorus maculatus	44.36	2.00e-138	485.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence