iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-018056

Ensembl Protein ID

Bra009201.1-P

UniProt Accession

M4CYA4; M4CYA4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra009201	Bra009201.1	Bra009201.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-59	196.6	103	137
UBD/Beta-Prp	3.80e-73	247.3	98	310

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           H++++ c++f +d + l+sGs+D+t+++WDl t +
   Q: 103  HEGEILCVSFsPDgKQLASGSGDKTVRLWDLNTET 137
           99*********999****************98865 PP

UBD/Beta-Prp

   S: 47   sl.sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvn 141
           ++   he+e+ +v+fspdgk l++gs D+t+++wdl+t +++ t kgh++ vl++++sp+ + lvsG++d  + +wd ++g+ l + lsgh+++++
   Q: 98   TIsDVHEGEILCVSFSPDGKQLASGSGDKTVRLWDLNTETPMFTCKGHKEHVLAVAWSPDAKCLVSGDRDGKVCCWDPSKGELLGNALSGHKKWIC 193
           55356******************************************************************************************* PP
   S: 142  cvvvhpdg.nl....lvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlq...tgecvrtlnghtdnvksvr 229
           ++++ p   ++    +v++++D+  r+Wd   ++ l  l+g ht++v+++++  +g  + +gs+d+t+++w++    +g   ++l++h  +v+s+ 
   Q: 194  GIAWEPAHlSYpsrrFVTCGKDGDARIWDFTLKRTLIVLSG-HTRAVTCVKWGGDG-TIYTGSQDSTIRMWEITqqgQGILKHILRDHAGWVNSLS 287
           ****998655444449**************99999999999.************98.9***************9988888899************* PP
   S: 230  fspnderlvsgs...sDgsiriWdl 251
           +s  +e+++ ++   + +++ + d 
   Q: 288  LS--TEYVLRTGafdHTRQVTCSDE 310
           **..666666555666666766664 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAMNTVMCLL TDAEGTPLGS AMYIPHNAGH LQLINLVNTF LNNEEKLSYS FYVSDEELLV 60
SVGTYMERNS VSVENVLKIV YRQQAVFRIR PVYRCSQTIS DVHEGEILCV SFSPDGKQLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGATGA ACACAGTGAT GTGTCTGTTA ACAGACGCAG AAGGAACTCC ACTAGGTTCT 60
GCTATGTATA TCCCTCACAA CGCAGGGCAT TTGCAGCTCA TCAACTTGGT CAATACGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR012972--NLE
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08154--NLE
PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence