iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oba-075289

Ensembl Protein ID

OBART02G13060.2

UniProt Accession

A0A0D3F3X0; A0A0D3F3X0_9ORYZ

Protein Name

E3 ubiquitin-protein ligase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OBART02G13060	OBART02G13060.1	OBART02G13060.1
OBART02G13060	OBART02G13060.2	OBART02G13060.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	88.28	5.00e-137	484.00	IUUC-Ath-007192

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Oryza barthii

Functional Description
(View)

E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.

Protein Sequence
(Fasta)

MDMASIECVS YSDSMDDDDD DGVGVGGVSH LPRPILVKPS SAAAAVNVVV VSAGSGGGGG 60
GRRRRRGRGR GRGPRRPPGD ERPRAARVPR LHQLHCQNGH TLCSTCKTRV HNRCPTCRQE 120

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Nucleotide Sequence
(Fasta)

ATGGACATGG CGAGCATCGA GTGCGTCTCC TACTCCGACA GCATGGATGA CGACGACGAC 60
GATGGCGTCG GCGTCGGCGG CGTCTCCCAC CTGCCACGCC CCATCCTCGT CAAGCCCTCC 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018121--7-in-absentia-prot_TRAF-dom
IPR004162--SINA-like
IPR008974--TRAF-like
IPR013083--Znf_RING/FYVE/PHD
IPR013010--Znf_SIAH

PROSITE

PS51081--ZF_SIAH

Pfam

PF03145--Sina

Gene Ontology

GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0007275--P:multicellular organism development
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006522	Arabidopsis lyrata	88.67	8.00e-139	485.00
IUUC-Ath-007192	Arabidopsis thaliana	88.28	2.00e-138	484.00
IUUC-Bdi-014729	Brachypodium distachyon	95.70	4.00e-149	519.00
IUUC-Bol-015983	Brassica oleracea	87.11	2.00e-137	480.00
IUUC-Bra-016910	Brassica rapa	87.89	4.00e-138	483.00
IUUC-Dse-031545	Dothistroma septosporum	31.82	2.00e+00	27.70
IUUC-Mtr-058699	Medicago truncatula	91.80	2.00e-142	498.00
IUUC-Mac-065670	Musa acuminata	92.19	8.00e-144	502.00
IUUC-Pop-100033	Populus trichocarpa	91.41	3.00e-142	496.00
IUUC-Ppe-101960	Prunus persica	94.14	9.00e-147	512.00
IUUC-Sly-111259	Solanum lycopersicum	89.76	4.00e-138	483.00
IUUC-Stu-112571	Solanum tuberosum	90.16	2.00e-139	487.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence