iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112712

Ensembl Protein ID

PGSC0003DMT400045846

UniProt Accession

M1BIA6; M1BIA6_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400017783	PGSC0003DMT400045846	PGSC0003DMT400045846

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.80e-27	95.8	237	309

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+ef+Cp+sl lM +Pvv++sG ty+r  I kw+a+g+ tcP+tr++l++ +l+Pn+t+++li++w +++++
   Q: 237  PPDEFKCPLSLRLMYEPVVIASGRTYERFRILKWFAEGNDTCPTTRRKLANLSLIPNHTMKDLISRWSATHGV 309
           59********************************************************************986 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MYMELFQFIT RVSVLLPAIE AARPGCSSGR EALCRLNIEI DKAKTLRQHC TESSKLYLAL 60
TGDSILSRCE KSRNLFKQSL SQVQNQVPVS LAAEISQLIA ELRGVVFSLD PSEEEAGKVL 120

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Nucleotide Sequence
(Fasta)

ATGTACATGG AGCTATTTCA GTTTATAACT AGAGTTTCAG TATTACTTCC TGCAATTGAA 60
GCAGCCCGTC CTGGATGCTC TTCCGGCAGA GAGGCACTTT GCCGGTTGAA CATTGAAATT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bra-016719	Brassica rapa	37.38	4.00e-91	328.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence