iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-016638

Ensembl Protein ID

Bra011068.1-P

UniProt Accession

M4D3L4; M4D3L4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra011068	Bra011068.1	Bra011068.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.30e-07	32.2	126	168

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+ f+    +++lp C H+fh  C+ +w        ++++CPlCr
   Q: 126  CSVCLSKFESVeiLRLLPkCRHAFHVGCIDQW------LEQHATCPLCR 168
           ********6623355666**************......**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MYQIFIFFLT IFHSYYYASA QPPAPPFRNG DLVTNFEPSL AVVTGVLAIM FTLTFVLLVY 60
AKCCHIDLRS GTGDGRRQDR RLRQGIFFNR STNSSDRFSG LDKTAIESLP LFRFSALKGS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTATCAAA TCTTCATCTT CTTTCTTACA ATCTTCCACA GTTACTACTA TGCATCTGCT 60
CAGCCTCCTG CTCCTCCGTT CCGAAACGGC GACCTCGTCA CAAACTTCGA GCCGAGTTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bta-012597	Bos taurus	45.83	3.00e-15	76.60
IUUC-Bol-016028	Brassica oleracea	95.47	0.00e+00	679.00
IUUC-Mac-064747	Musa acuminata	37.72	3.00e-64	238.00
IUUC-Oba-075667	Oryza barthii	37.45	8.00e-38	150.00
IUUC-Ogl-077500	Oryza glaberrima	37.45	8.00e-38	150.00
IUUC-Ogu-078252	Oryza glumaepatula	36.33	9.00e-38	150.00
IUUC-Ome-081414	Oryza meridionalis	37.11	4.00e-36	145.00
IUUC-Oni-082687	Oryza nivara	37.45	8.00e-38	150.00
IUUC-Osa-085704	Oryza sativa	37.45	8.00e-38	150.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence