iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017573

Ensembl Protein ID

Bra011355.1-P

UniProt Accession

M4D4F1; M4D4F1_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra011355	Bra011355.1	Bra011355.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.80e-23	82.6	551	580
UBD/Beta-Prp	1.00e-46	160.5	503	638

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           Ht+ +t+++f ++ ++l+++s D+t++vWD
   Q: 551  HTAMITDVRFsPNlPRLATSSFDKTVRVWD 580
           88889******999**************** PP

UBD/Beta-Prp

   S: 45   lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvv 140
           + s+   +++vt++ fs dgk+l++++ D+ + +w  +t k+  tl++h++++++++fsp+  +l++ s d+t+rvwd +++  +   + gh++++
   Q: 503  VNSVRASTSKVTCCHFSLDGKMLASAGHDKKAVIWHTDTMKPKTTLEEHTAMITDVRFSPNLPRLATSSFDKTVRVWDADNKGYSLRNFIGHSSMI 598
           334444444577777777777777777777777777777777777777777777777777777777777777777777766443333777777777 PP
   S: 141  ncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltggh 179
           ++v +hp++ +l+ s+ +D+ +r W++++g++ r  +gg 
   Q: 599  TSVDFHPNKdDLICSCDDDGEIRYWSINNGTCSRVYKGGS 638
           7777777777777777777777777777777777776644 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSQTNWEADK MLDVYIHDYL VKRDLKATAQ AFQAEGKISL DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSEVAASYIE AYEERIKMPT QRDSLDEAAM KRFGDNGGQM LDPNHASMLK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTCAGA CCAACTGGGA AGCTGATAAA ATGTGAGTCC TTTTTTAATT TTAATTTTGA 60
TTGCCTTTTT TATTTGATGT TTGTGCTGAT TGCTTACTGG AAGAGTCTTT AATTTTGGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR006594--LisH
IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015433	Brassica oleracea	96.21	0.00e+00	1132.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence