iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-005966

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348719

Gene Name

ARALYDRAFT_912964

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_700706.1	scaffold_700706.1	scaffold_700706.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-13	50.6	584	618

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDlrtg 33
           H++ ++ ++f +    l++++s D+ +k+WDlr+ 
   Q: 584  HQEHINVVKFsNHspFLFATSSFDKDVKLWDLRQE 618
           788899999983343457**************986 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MATLTEIATL EEKYIELCKK HGILPNTAVL SAFFEAEVKK SRNQRCIMNL YVDRVKYDDY 60
HPLLELCNEI NTSEVQGIDL FVRSSCSLED HYALSLIRSV NQKLRVVHLH DSFGKNFWRD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTAATCTTA AGCTGTGATT GAATGGCTAC GCTCACTGAA ATAGCAACCC TTGAGGAGAA 60
GTGAGTTTTT TCTTTTCACC TTTTTTTTTT TTTTTTTTTT TGTGTATCTT ATCTACTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032675--L_dom-like
IPR003603--U2A'_phosphoprotein32A_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00446--LRRcap
SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0071493--P:cellular response to UV-B

KEGG

aly:ARALYDRAFT_912964

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-007257	Arabidopsis thaliana	92.99	0.00e+00	1395.00
IUUC-Bol-016080	Brassica oleracea	75.57	0.00e+00	1186.00
IUUC-Bra-017152	Brassica rapa	76.59	0.00e+00	1185.00
IUUC-Cme-027163	Cyanidioschyzon merolae	35.07	2.00e-71	263.00
IUUC-Gma-044343	Glycine max	53.93	0.00e+00	780.00
IUUC-Mtr-057634	Medicago truncatula	54.20	0.00e+00	806.00
IUUC-Mac-065375	Musa acuminata	57.29	1.00e-150	526.00
IUUC-Ppa-095407	Physcomitrella patens	51.30	2.00e-137	482.00
IUUC-Pop-099267	Populus trichocarpa	57.77	0.00e+00	807.00
IUUC-Ppe-101596	Prunus persica	56.89	0.00e+00	758.00
IUUC-Smo-109318	Selaginella moellendorffii	52.30	3.00e-123	435.00
IUUC-Sly-111655	Solanum lycopersicum	52.88	0.00e+00	733.00
IUUC-Stu-111974	Solanum tuberosum	67.87	3.00e-170	591.00
IUUC-Tca-121812	Theobroma cacao	56.25	0.00e+00	843.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence