iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007257

UUCD1 version

UUC-ArT-00576

Ensembl Protein ID

AT4G34280.1

UniProt Accession

Q8GYY7; Q8GYY7_ARATH

Genbank Protein ID

AAO64896.1; AEE86354.1; BAC41980.1

Protein Name

At4g34280; Putative uncharacterized protein At4g34280/F10M10_50; Transducin family protein / WD-40 repeat family protein

Genbank Nucleotide ID

BT005961; CP002687; AK117309

Gene Name

DHU1; DWD HYPERSENSITIVE TO UV-B 1; At4g34280; At4g34280/F10M10_50; F10M10.50; F10M10_50

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT4G34280	AT4G34280.1	AT4G34280.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Post-translational Modifications (PTMs)
dbPPT
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.80e-12	47.3	582	616

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd..tllvsGsdDgtikvWDlrtg 33
           H++ ++ ++f +    l++++s D+ +k+WDlr+ 
   Q: 582  HQEHINVVKFsNHspFLFATSSFDKDVKLWDLRQE 616
           788899999983343457**************986 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MATLTEIATL EEKYIELCKM HGILPNTAIL SAFFEAEVKK SRNQRCIMNL YVDRVKYDDY 60
LPLLELCNEI NTSEVQGIDL FVRSACSLED HYALPLIRSV NQKLRVVHLH DSFGKNFWQD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAGCTTCTA AGCCAGGTGG CGGGTTTTGG TGCAAAGTCT TTGATATGTT CGGAGTTGCT 60
GCTTCGTAGA GAAAAAACTT TTCTGATAAC ATCGGAGTAA AAGGAAAGTA AGTCGGAGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032675--L_dom-like
IPR003603--U2A'_phosphoprotein32A_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00446--LRRcap
SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0004872--F:receptor activity
GO:0071493--P:cellular response to UV-B

KEGG

ath:AT4G34280

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005966	Arabidopsis lyrata	92.99	0.00e+00	1389.00
IUUC-Bol-016080	Brassica oleracea	74.62	0.00e+00	1152.00
IUUC-Bra-017152	Brassica rapa	76.02	0.00e+00	1173.00
IUUC-Cme-027163	Cyanidioschyzon merolae	35.34	1.00e-72	267.00
IUUC-Gma-044343	Glycine max	52.06	0.00e+00	764.00
IUUC-Mtr-057634	Medicago truncatula	52.90	0.00e+00	775.00
IUUC-Mac-065375	Musa acuminata	46.15	0.00e+00	637.00
IUUC-Ppa-095407	Physcomitrella patens	51.90	2.00e-136	479.00
IUUC-Pop-099267	Populus trichocarpa	56.41	0.00e+00	788.00
IUUC-Ppe-101596	Prunus persica	56.69	0.00e+00	749.00
IUUC-Smo-108795	Selaginella moellendorffii	53.35	5.00e-126	444.00
IUUC-Sly-111655	Solanum lycopersicum	52.70	0.00e+00	715.00
IUUC-Stu-111974	Solanum tuberosum	52.86	0.00e+00	702.00
IUUC-Tca-121812	Theobroma cacao	55.26	0.00e+00	823.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence