iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099267

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000345

Gene Name

POPTRDRAFT_201996; POPTR_0009s09550g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0009s09550	POPTR_0009s09550.1	POPTR_0009s09550.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.10e-12	46.0	506	534

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf....sdtllvsGsdDgtikvWDl 30
           sv +l++    +   l++Gsd+g++k++D+
   Q: 506  SVLGLCWlkkyP-SKLIAGSDNGSLKLYDI 534
           7999****9775.689*************6 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MATDIPSFNI PTLEQMYIDS CKRRDVLPNT EILSGFFKAE VKKSCNELCS LEIILDHLKD 60
IDVPPLLDVC ATIETSEIEA VDIRNGPSCS LNGECALSLM RAFNQKLRAV DLQDSPFGKD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCATTGAGTT ACTTTTTTCC TTTTCTTTTT CCGTTTATTT CTTTTCTTTT CTTTTCTTTG 60
CTGATAACCG GAGACTCCGA ATCTAAATCA TGGCCACTGA TATCCCATCC TTTAATATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032675--L_dom-like
IPR003603--U2A'_phosphoprotein32A_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00446--LRRcap
SM00320--WD40

KEGG

pop:POPTR_0009s09550g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005966	Arabidopsis lyrata	57.07	0.00e+00	783.00
IUUC-Ath-007257	Arabidopsis thaliana	56.16	0.00e+00	775.00
IUUC-Bol-016080	Brassica oleracea	56.64	0.00e+00	834.00
IUUC-Bra-017152	Brassica rapa	57.30	0.00e+00	829.00
IUUC-Gma-044343	Glycine max	67.12	0.00e+00	1046.00
IUUC-Mac-065620	Musa acuminata	55.31	0.00e+00	773.00
IUUC-Ppe-101596	Prunus persica	69.74	0.00e+00	997.00
IUUC-Sly-111655	Solanum lycopersicum	63.09	0.00e+00	924.00
IUUC-Stu-111974	Solanum tuberosum	63.93	0.00e+00	912.00
IUUC-Tca-121812	Theobroma cacao	68.59	0.00e+00	1101.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence