iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099822

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

XM_002298131.1; POPTR_0001s21960g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s21960	POPTR_0001s21960.1	POPTR_0001s21960.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.10e-08	34.2	93	135

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl +f  k+ ++  p C Hvfh++C+  w         + +CP+Cr
   Q: 93   CAICLGEFeeKEAVKMIPkCHHVFHLQCIDTW------LEMHVTCPVCR 135
           ********66444888889*************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

FYSRTGFEPS VALIILFLLI ALFFMGFFSI YTQDFYNSHR QRSTGTPGPA STSSRPSRAS 60
TSSRITRGLD PQVVNSLPVY SYYHGDVKYQ IECAICLGEF EEKEAVKMIP KCHHVFHLQC 120

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Nucleotide Sequence
(Fasta)

TTTTATTCAC GCACAGGGTT TGAACCGTCT GTAGCCTTAA TAATTCTATT TCTCTTAATA 60
GCTCTCTTCT TCATGGGATT CTTTTCTATC TACACCCGTA AGTTCTCCGT CAACCCATCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s21960g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bra-017714	Brassica rapa	50.00	2.00e-22	97.40
IUUC-Stu-112149	Solanum tuberosum	42.86	2.00e-23	101.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence