iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016104

Ensembl Protein ID

Bo7g101480.1

UniProt Accession

A0A0D3DE48; A0A0D3DE48_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo7g101480	Bo7g101480.1	Bo7g101480.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.00e-08	34.0	66	109

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl d++ +   +++ +C+H+fh +C++ w     + s++ +CPlCr
   Q: 66   CSICLVDYEAEdavTHLPRCNHLFHINCIEPW-----LLSGHLTCPLCR 109
           ********44444477777*************.....8**********8 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MFSLLFPRSP LCTVAIVFYT FVCIPLERLK KQCGVAEPQH DDGYHLPGFM FGDKQKKNEE 60
EEKICCSICL VDYEAEDAVT HLPRCNHLFH INCIEPWLLS GHLTCPLCRS FVFSPPTARI 120

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Nucleotide Sequence
(Fasta)

ATGTTCTCTT TGTTGTTTCC GCGGTCACCT TTGTGCACAG TAGCGATAGT ATTCTACACT 60
TTTGTGTGCA TTCCCTTAGA GAGGTTGAAG AAGCAGTGTG GAGTTGCTGA ACCGCAACAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR020103--PsdUridine_synth_cat_dom
IPR006224--PsdUridine_synth_RluC/D_CS
IPR006145--PsdUridine_synth_RsuA/RluD
IPR002942--S4_RNA-bd
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01129--PSI_RLU
PS50089--ZF_RING_2

Pfam

PF00849--PseudoU_synth_2
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0009982--F:pseudouridine synthase activity
GO:0003723--F:RNA binding
GO:0008270--F:zinc ion binding
GO:0001522--P:pseudouridine synthesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006032	Arabidopsis lyrata	74.78	2.00e-46	177.00
IUUC-Ath-006708	Arabidopsis thaliana	68.99	2.00e-42	164.00
IUUC-Bra-017196	Brassica rapa	92.48	0.00e+00	906.00
IUUC-Gma-043261	Glycine max	46.21	2.00e-21	94.40
IUUC-Pop-099029	Populus trichocarpa	34.09	3.00e-17	80.10
IUUC-Ppe-101276	Prunus persica	36.96	5.00e-19	86.70
IUUC-Stu-112159	Solanum tuberosum	37.04	1.00e-17	82.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence