iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aly-006572

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348720

Gene Name

ARALYDRAFT_919319

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_802719.1	scaffold_802719.1	scaffold_802719.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-06	29.7	366	407

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+e++   k+ +  lpC H +h +C+  w         + +CP+Cr
   Q: 366  CAVCKEEMnvgKE-VAELPCRHKYHSECIVPW------LGIRNTCPVCR 407
           ********99555.999***************......**********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MAELSCLQIH DANDAVFNHY HHQRRLHDHL RDQSFSQILY PLPHWVQSDD GDLYVSESDF 60
SPGDVSVSDL VFTAADGLDL LDRRSFVMDL FHQRVEQSQV CPLDDDGIDD FENYEMRGDN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCCGATCCAA GGCCGGAAAA TATGGCGGAG CTGTCTTGCC TTCAGATCCA CGATGCTAAC 60
GACGCCGTTT TCAACCATTA CCACCACCAA CGGCGGCTAC ATGATCACCT GAGAGATCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_919319

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006786	Arabidopsis thaliana	88.36	1.00e-158	551.00
IUUC-Bol-016164	Brassica oleracea	66.36	1.00e-105	375.00
IUUC-Bra-017179	Brassica rapa	64.17	2.00e-99	355.00
IUUC-Gma-043673	Glycine max	46.15	4.00e-36	144.00
IUUC-Mtr-058184	Medicago truncatula	32.72	5.00e-41	161.00
IUUC-Sly-111587	Solanum lycopersicum	41.63	5.00e-37	148.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence