iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017102

Ensembl Protein ID

Bra013894.1-P

UniProt Accession

M4DBN4; M4DBN4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra013894	Bra013894.1	Bra013894.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.90e-29	100.9	137	174

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+  vt++a+ s+ + l ++s D t+++WD  +g ++
   Q: 137  GHQKVVTGIALpSGsDKLYTASKDETLRIWDCASGQCT 174
           89*********966799***************999986 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MDLDMNGGNT RVFQRLSGVS NQKVCFHWRA GRCNRYPCPF LHRDSPPPAP FPGSSSSTNN 60
KRIADDDDSG FAGSSHRRGP GSGNNTWGRF GGNRTVTKTE KLCKFWADGN CPYGDKCKYL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTTAG ATATGAACGG AGGAAACACG AGAGTCTTCC AAAGACTCAG TGGCGTCTCC 60
AACCAGAAGG TCTGTTTCCA CTGGCGAGCC GGCCGCTGCA ACCGCTACCC TTGCCCTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR000571--Znf_CCCH

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50103--ZF_C3H1

Pfam

PF00400--WD40
PF00642--zf-CCCH

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40
SM00356--ZnF_C3H1

Gene Ontology

GO:0046872--F:metal ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002831	Amborella trichopoda	56.94	5.00e-146	510.00
IUUC-Ath-007223	Arabidopsis thaliana	88.19	0.00e+00	771.00
IUUC-Gma-042894	Glycine max	66.13	2.00e-161	561.00
IUUC-Mac-065071	Musa acuminata	61.47	1.00e-156	545.00
IUUC-Ogl-077192	Oryza glaberrima	51.82	1.00e-75	275.00
IUUC-Pop-099994	Populus trichocarpa	64.82	8.00e-170	589.00
IUUC-Ppe-101609	Prunus persica	70.70	0.00e+00	643.00
IUUC-Sly-111514	Solanum lycopersicum	63.24	6.00e-157	546.00
IUUC-Stu-112646	Solanum tuberosum	63.89	2.00e-161	561.00
IUUC-Tca-121658	Theobroma cacao	65.48	7.00e-169	586.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence