iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007092

Ensembl Protein ID

AT3G61790.1

UniProt Accession

Q84JL3; Q8LFQ3; Q9M359; SINA3_ARATH

Genbank Protein ID

CAB71109.1; AEE80257.1; AAO42011.1; AAO50612.1; AAM61286.1

Protein Name

E3 ubiquitin-protein ligase SINAT3; RING-type E3 ubiquitin transferase SINAT3; Seven in absentia homolog 3

Genbank Nucleotide ID

AL132959; CP002686; BT003967; BT005079; AY084712

Gene Name

SINAT3; At3g61790; F15G16.180

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT3G61790	AT3G61790.1	AT3G61790.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	PINA	HINT	Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	32.94	4.00e-36	148.00	IUUC-Dme-031700

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Arabidopsis thaliana

Functional Description
(View)

E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. It probably triggers the ubiquitin-mediated degradation of different substrates.

Protein Sequence
(Fasta)

MDLDSMDCTS TMDVTDDEEI HQDRHSYASV SKHHHTNNNT TNVNAAASGL LPTTTSVHEL 60
LECPVCTNSM YPPIHQCHNG HTLCSTCKAR VHNRCPTCRQ ELGDIRCLAL EKVAESLELP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TAAATTCTTC TGAATCTCTT ATAATTCAAT TTGTTTCCAA ATAACATTCT CTCTTTAACA 60
CAGCCGCCTT TGTGACCGTC CGATCTTAAA TCAGCGTTTC CGGTTCATTT GACGGCAACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018121--7-in-absentia-prot_TRAF-dom
IPR004162--SINA-like
IPR008974--TRAF-like
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR013010--Znf_SIAH

PROSITE

PS50089--ZF_RING_2
PS51081--ZF_SIAH

Pfam

PF03145--Sina

Gene Ontology

GO:0005634--C:nucleus
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0007275--P:multicellular organism development
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

ath:AT3G61790

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003118	Amborella trichopoda	82.82	2.00e-134	471.00
IUUC-Bra-017336	Brassica rapa	92.41	4.00e-170	589.00
IUUC-Dme-031700	Drosophila melanogaster	33.74	9.00e-34	136.00
IUUC-Gma-042926	Glycine max	83.01	1.00e-134	471.00
IUUC-Mac-065670	Musa acuminata	79.38	4.00e-153	533.00
IUUC-Obr-076037	Oryza brachyantha	81.08	7.00e-132	462.00
IUUC-Ogl-077148	Oryza glaberrima	81.08	6.00e-132	462.00
IUUC-Ogu-078042	Oryza glumaepatula	81.08	3.00e-132	463.00
IUUC-Oin-079325	Oryza indica	81.08	6.00e-132	462.00
IUUC-Olo-080244	Oryza longistaminata	81.08	2.00e-132	465.00
IUUC-Oni-082163	Oryza nivara	81.08	6.00e-132	462.00
IUUC-Oru-084833	Oryza rufipogon	81.08	6.00e-132	462.00
IUUC-Osa-085316	Oryza sativa	81.08	6.00e-132	462.00
IUUC-Ppa-095212	Physcomitrella patens	86.43	6.00e-139	486.00
IUUC-Smo-109412	Selaginella moellendorffii	86.77	7.00e-140	489.00
IUUC-Sly-111259	Solanum lycopersicum	79.76	2.00e-152	530.00
IUUC-Stu-112571	Solanum tuberosum	79.88	3.00e-153	533.00
IUUC-Sbi-114035	Sorghum bicolor	82.42	3.00e-132	463.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence