iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121603

Ensembl Protein ID

EOY16046

UniProt Accession

A0A061FG52; A0A061FG52_THECC

Genbank Protein ID

EOY16046.1

Protein Name

Transducin/WD40 repeat-like superfamily protein isoform 1

Genbank Nucleotide ID

CM001886

Gene Name

TCM_034942

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_034942	EOY16047	EOY16047
TCM_034942	EOY16046	EOY16046

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.10e-06	26.8	380	412

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d  ++ a+ +d ++l++G+ D t+++WD+r
   Q: 380  GHLDYSFASAWhPDgHILATGNQDTTCRLWDIR 412
           799999999***998999*************86 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MEHFQNDDLE YVVDDYYDVD DFEHDNPFAE PEPQRDTADL DSFDSDVEDD LESSKPKTDT 60
SAMEARNGKD IQGIPWERLN FTRDKYRETR LRQYKNYENL SGSREEMEKE CLQVEKGKAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGCGATGGG GAAGGGCTTC ATTGCTGTTT TAGCAAAAGC CTCTATAAAA CTTTCTTCTT 60
CGTTTTCCTG TTTTTCCCTC TGTTTTTTTG CTTAATTGTC TATAGCATTT TAAACGAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000486	Aegilops tauschii	61.22	2.00e-160	557.00
IUUC-Atr-002734	Amborella trichopoda	63.73	0.00e+00	625.00
IUUC-Aly-005521	Arabidopsis lyrata	61.18	1.00e-168	585.00
IUUC-Ath-007611	Arabidopsis thaliana	61.37	8.00e-168	582.00
IUUC-Bol-015183	Brassica oleracea	57.81	3.00e-157	546.00
IUUC-Bra-017403	Brassica rapa	61.57	2.00e-175	607.00
IUUC-Cme-027214	Cyanidioschyzon merolae	39.48	6.00e-52	198.00
IUUC-Gma-044288	Glycine max	66.21	0.00e+00	653.00
IUUC-Hvu-047718	Hordeum vulgare	56.24	6.00e-146	509.00
IUUC-Kpa-049267	Komagataella pastoris	27.38	8.00e-29	120.00
IUUC-Lpe-051582	Leersia perrieri	58.55	4.00e-152	530.00
IUUC-Mtr-058564	Medicago truncatula	67.10	2.00e-180	624.00
IUUC-Oin-079185	Oryza indica	55.51	5.00e-144	503.00
IUUC-Olo-080479	Oryza longistaminata	53.72	4.00e-127	447.00
IUUC-Pop-099735	Populus trichocarpa	86.35	1.00e-165	574.00
IUUC-Sit-110668	Setaria italica	58.18	2.00e-148	518.00
IUUC-Sly-111186	Solanum lycopersicum	65.06	2.00e-180	624.00
IUUC-Stu-111950	Solanum tuberosum	66.52	0.00e+00	630.00
IUUC-Sbi-113990	Sorghum bicolor	61.71	1.00e-166	578.00
IUUC-Tae-124553	Triticum aestivum	56.46	1.00e-144	505.00
IUUC-Tur-126710	Triticum urartu	55.73	4.00e-150	523.00
IUUC-Vvi-131311	Vitis vinifera	70.78	0.00e+00	694.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence