iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.1__2060__AT1G18830.1	fgenesh2_kg.1__2060__AT1G18830.1	fgenesh2_kg.1__2060__AT1G18830.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-16	59.0	74	107

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf....sdtllvsGsdDgtikvWDlrtgvll 36
           v++l+f    + + l+sG+dDgt+ +WDl+   ++
   Q: 74   VRGLEFnvksP-NKLASGTDDGTVCIWDLTNPSKP 107
           77788899633.99***************987666 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MDCINSIDRS AFVAIAPESP FIATGTMAGV VIAKALSGLI DSLREVMDLD LMVTSPVASL 60
TGTSVYGIQF EFYVRGLEFN VKSPNKLASG TDDGTVCIWD LTNPSKPCHY LKGTGSYMQS 120

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Nucleotide Sequence
(Fasta)

ATGGATTGCA TAAACAGTAT TGATAGATCC GCTTTCGTTG CCATTGCGCC GGAATCTCCG 60
TTCATTGCGA CCGGAACAAT GGCCGGAGTA GTAGATCTGT CGTTTAGTTC ATCCTCTAAT 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR024298--ACE1_Sec16_Sec31
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12931--Sec16_C
PF00400--WD40

SMART

SM00320--WD40

KEGG

aly:ARALYDRAFT_472106

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ath-006685	Arabidopsis thaliana	71.88	0.00e+00	1264.00
IUUC-Bol-015526	Brassica oleracea	63.77	0.00e+00	966.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence