iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099712

UUCD1 version

UUC-PoT-01550

Ensembl Protein ID

POPTR_0019s05540.1

UniProt Accession

A9PD36; A9PD36_POPTR

Genbank Protein ID

ABK94289.1; ABK95448.1; EEF00242.1

Protein Name

Ubiquitin-conjugating enzyme E2-17 kDa family protein

Genbank Nucleotide ID

EF146198; EF147435; CM000355

Gene Name

POPTR_0019s05540g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0019s05540	POPTR_0019s05540.1	POPTR_0019s05540.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	6.50e-53	179.3	8	143

Active Site

Position(s)	Description	Evidence
88	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeek 91
           Rl++++k+l++dpp+gis  p+d+ +++ w+++i+Gp+dtp++gg+Fkl+++f+edYP kPP+v+f++++fhPn+y++G++Cl+il+  ++
   Q: 8    RLMRDFKRLQQDPPAGISGAPQDN-NIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQ 95
           9**********************9.9************************************************************9..** PP
   S: 92   Wspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvre 139
           Wsp ++v+ +l+siqsll++pnp+sp+n+eaa+++++ ++ey+++vre
   Q: 96   WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSETKREYNRRVRE 143
           *********************************************985 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSTPARKRLM RDFKRLQQDP PAGISGAPQD NNIMLWNAVI FGPDDTPWDG GTFKLTLQFT 60
EDYPNKPPTV RFVSRMFHPN IYADGSICLD ILQNQWSPIY DVAAILTSIQ SLLCDPNPNS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGAAACACG CAAGAACAAA CCCCACCGCA CCCCACCCCA CCCCACCCCA CCAATAAAAA 60
AGGAAAAGAA AAAAGAAGCC AAACCCTCCT CCTCCTCCTC CTCCTCCTCT ATATCTCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0006281--P:DNA repair
GO:0016574--P:histone ubiquitination
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination

KEGG

pop:POPTR_0019s05540g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006336	Arabidopsis lyrata	98.03	6.00e-79	285.00
IUUC-Ath-007547	Arabidopsis thaliana	98.03	6.00e-79	285.00
IUUC-Bol-015726	Brassica oleracea	96.71	6.00e-87	314.00
IUUC-Bra-016809	Brassica rapa	96.71	3.00e-87	313.00
IUUC-Kpa-049225	Komagataella pastoris	64.00	9.00e-59	218.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence