iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
TRANSFAC
Protein-protein Interaction
HINT
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-06	29.6	545	587

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCle++k+      v +CgH +h  C++kw       s + +CP+C+
   Q: 545  CAICLEEYKEKeelGEVKGCGHDYHGRCIKKW------LSMKNSCPICK 587
           ********55433333567*************......999999****6 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MLVPHVSPLG LVAGLSLMYS DLRIVLWTFL VDWESKANLN SSHLEVILIH RGLMGHRHFL 60
GSSQFFDDEH DQGWNHTHPE HPYSSQATSG TSENRSHVYP AENMLNEGMP VSSHWNSSPG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTAGTTC CTCATGTTAG CCCATTAGGA TTGGTGGCTG GCCTATCCTT GATGTATTCT 60
GATTTGCGGA TTGTGTTGTG GACCTTCTTG GTTGATTGGG AAAGCAAAGC GAACTTGAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

ath:AT2G37150

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005628	Arabidopsis lyrata	89.95	0.00e+00	863.00
IUUC-Bol-015148	Brassica oleracea	75.74	0.00e+00	687.00
IUUC-Bra-016972	Brassica rapa	76.11	0.00e+00	671.00
IUUC-Gma-043289	Glycine max	44.78	2.00e-101	362.00
IUUC-Mtr-058573	Medicago truncatula	40.46	9.00e-87	313.00
IUUC-Pop-099952	Populus trichocarpa	52.15	3.00e-46	179.00
IUUC-Ppe-101477	Prunus persica	45.42	2.00e-103	369.00
IUUC-Tca-121354	Theobroma cacao	46.76	1.00e-109	389.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence