iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131052

UUCD1 version

UUC-ViV-00576

Ensembl Protein ID

VIT_08s0105g00190.t01

UniProt Accession

F6H6S5; F6H6S5_VITVI

Genbank Protein ID

CCB47911.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN595245

Gene Name

VIT_08s0105g00190

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_08s0105g00190	VIT_08s0105g00190.t01	VIT_08s0105g00190.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.80e-34	116.3	5	79

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.tcPvtrqpl.teedlvPnltlrrliqawceens 73
           +vp++flCpIsle+M+dPv++++Gitydr+sIekwl sg++ tcP t+q l +++dl+Pn+tlrrliqawc  n+
   Q: 5    DVPPFFLCPISLEIMKDPVTVSTGITYDRESIEKWLFSGKNnTCPATKQVLsADSDLTPNHTLRRLIQAWCTLNA 79
           69**********************************999888*********888999**************9886 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MEEIDVPPFF LCPISLEIMK DPVTVSTGIT YDRESIEKWL FSGKNNTCPA TKQVLSADSD 60
LTPNHTLRRL IQAWCTLNAS NGVERIPTPK IPINKIQIVK LLNDAKSPQL QMKCIGKLRA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAGATTTCT TTTAAACTTG ATTCTTGATT CAGCTCCTTT TCTGGGTGAT GGAAGAAATC 60
GATGTTCCTC CATTTTTCCT CTGCCCGATT TCTTTGGAGA TTATGAAAGA TCCGGTGACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR011987--ATPase_V1-cplx_hsu_C
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

vvi:100250551

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002430	Amborella trichopoda	51.68	4.00e-116	410.00
IUUC-Aly-006194	Arabidopsis lyrata	57.69	3.00e-135	473.00
IUUC-Ath-007471	Arabidopsis thaliana	58.41	3.00e-135	474.00
IUUC-Bol-015782	Brassica oleracea	59.13	2.00e-137	481.00
IUUC-Bra-016841	Brassica rapa	59.71	2.00e-140	491.00
IUUC-Gma-043412	Glycine max	65.31	7.00e-155	539.00
IUUC-Mtr-058052	Medicago truncatula	65.54	5.00e-159	553.00
IUUC-Mac-065005	Musa acuminata	53.45	3.00e-119	420.00
IUUC-Pop-099305	Populus trichocarpa	69.73	2.00e-166	577.00
IUUC-Ppe-102059	Prunus persica	67.07	8.00e-165	572.00
IUUC-Sly-111579	Solanum lycopersicum	64.81	3.00e-147	513.00
IUUC-Stu-112238	Solanum tuberosum	65.78	4.00e-163	566.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence