iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095899

Ensembl Protein ID

PP1S371_53V6.2

UniProt Accession

A9TYD6; A9TYD6_PHYPA

Genbank Protein ID

EDQ51589.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545258

Gene Name

PHYPADRAFT_152585

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S371_53V6	PP1S371_53V6.2	PP1S371_53V6.2
PP1S371_53V6	PP1S371_53V6.1	PP1S371_53V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.10e-08	35.9	200	250

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           ++C  Cg ++  ++  + C++C++wfH +C+k++     +  +++ Cp+C++
   Q: 200  TFCGSCGGPYTADEFWIGCDICEKWFHGKCVKIT-PARAEHIKQYKCPSCSN 250
           79********************************.666666677******86 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MEGASMSTNP RTVDEVFKDF KGRRLGMLKA LTADVEEFYR QCDPEKENLC LYGFPEEAWE 60
VNLPAEEVPP ELPEPALGIN FARDGMQRKD WLSLVAVHSD AWLLAVAFYY GARFDKNERK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTGCTGTAG AAGTTTATGA GCTTTTGGAG TCGATGCTGT TTTGCTGTGT GTTTTTCGAG 60
CTCGAGGGCT AGGCGAGTGA TAGCCGGCGG CCTTCGGCAC AGCTTCTGGA AGGGGTTTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

KEGG

ppp:PHYPADRAFT_152585

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002983	Amborella trichopoda	69.77	4.00e-80	290.00
IUUC-Aly-005868	Arabidopsis lyrata	64.71	6.00e-72	263.00
IUUC-Acl-008106	Aspergillus clavatus	52.94	7.00e-06	45.40
IUUC-Afu-008783	Aspergillus fumigatus	51.28	3.00e-06	46.60
IUUC-Ang-009560	Aspergillus niger	61.76	4.00e-07	49.70
IUUC-Bol-015206	Brassica oleracea	64.66	1.00e-71	261.00
IUUC-Bra-016659	Brassica rapa	65.06	4.00e-72	263.00
IUUC-Gma-044204	Glycine max	74.00	7.00e-80	289.00
IUUC-Meu-056467	Macropus eugenii	39.22	2.00e-03	38.90
IUUC-Mtr-058517	Medicago truncatula	64.66	2.00e-78	284.00
IUUC-Nfi-068438	Neosartorya fischeri	51.28	3.00e-06	46.60
IUUC-Osa-085794	Oryza sativa	64.71	3.00e-73	267.00
IUUC-Pop-099768	Populus trichocarpa	70.70	4.00e-81	293.00
IUUC-Stu-111932	Solanum tuberosum	66.14	4.00e-80	290.00
IUUC-Tca-121204	Theobroma cacao	64.26	7.00e-78	282.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence