iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112296

Ensembl Protein ID

PGSC0003DMT400015499

UniProt Accession

M1A648; M1A648_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG401006052	PGSC0003DMT400015497	PGSC0003DMT400015497
PGSC0003DMG401006052	PGSC0003DMT400015499	PGSC0003DMT400015499

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.20e-06	28.8	14	58
E3 adaptor/Cullin RING/DCX/DWD	3.90e-17	62.9	697	731

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C++Cl+ + d    p+vlpCgH  ++dCl ++   +n   +++rCP C
   Q: 14   CPVCLQQYGDVstiPRVLPCGHSACEDCLAQL---QNPFPGTIRCPAC 58
           ********66566699*************555...7779********* PP

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsdtllvsGsdDgtikvWDlrtgvl 35
           gH++ v++la  d  l sGs+Dgt+++W l+++ +
   Q: 697  GHKSVVSSLAICDEVLYSGSWDGTVRLWCLSDHSP 731
           8**********6799*************9988765 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MAAESTLELE LPECPVCLQQ YGDVSTIPRV LPCGHSACED CLAQLQNPFP GTIRCPACTQ 60
LVKLPNPISS LPKNIDLLRF STLPHHNNND NSKGSHVSTQ KYDKDPIFIK PPLWSHEFYS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTGAATCTT TGGGTTTGGG TGCTTCATCG TTTTGATCAT TTTGTTGTCC GCTAAAATGG 60
CGGCAGAGTC AACTCTGGAG CTGGAGCTAC CGGAATGTCC AGTTTGTCTC CAACAATACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0853--WD repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011009--Kinase-like_dom
IPR000719--Prot_kinase_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50011--PROTEIN_KINASE_DOM
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS50089--ZF_RING_2

Pfam

PF00400--WD40
PF13445--zf-RING_UBOX

SMART

SM00184--RING
SM00220--S_TKc
SM00320--WD40

Gene Ontology

GO:0005524--F:ATP binding
GO:0004672--F:protein kinase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000569	Aegilops tauschii	29.32	6.00e-71	260.00
IUUC-Atr-003105	Amborella trichopoda	37.44	4.00e-133	467.00
IUUC-Aly-006480	Arabidopsis lyrata	37.94	2.00e-137	483.00
IUUC-Ath-007304	Arabidopsis thaliana	41.07	3.00e-175	608.00
IUUC-Bdi-015002	Brachypodium distachyon	35.28	2.00e-105	375.00
IUUC-Bol-015912	Brassica oleracea	41.50	7.00e-172	596.00
IUUC-Bra-017564	Brassica rapa	41.99	0.00e+00	630.00
IUUC-Gma-043879	Glycine max	43.36	0.00e+00	662.00
IUUC-Hvu-047671	Hordeum vulgare	37.07	4.00e-115	407.00
IUUC-Lpe-051223	Leersia perrieri	34.02	5.00e-99	354.00
IUUC-Mtr-058342	Medicago truncatula	59.06	3.00e-96	343.00
IUUC-Mac-065113	Musa acuminata	39.34	1.00e-157	549.00
IUUC-Oba-075807	Oryza barthii	36.20	3.00e-117	415.00
IUUC-Obr-076101	Oryza brachyantha	34.34	6.00e-122	430.00
IUUC-Ogl-077321	Oryza glaberrima	35.01	2.00e-114	405.00
IUUC-Ogu-078456	Oryza glumaepatula	33.91	4.00e-112	397.00
IUUC-Oin-079822	Oryza indica	36.15	8.00e-118	417.00
IUUC-Olo-080336	Oryza longistaminata	38.19	3.00e-104	371.00
IUUC-Ome-081976	Oryza meridionalis	35.37	2.00e-118	419.00
IUUC-Oni-082359	Oryza nivara	35.94	7.00e-117	413.00
IUUC-Opu-083757	Oryza punctata	34.45	2.00e-115	408.00
IUUC-Oru-085207	Oryza rufipogon	36.20	3.00e-117	415.00
IUUC-Osa-085546	Oryza sativa	32.54	2.00e-66	245.00
IUUC-Ppa-095665	Physcomitrella patens	33.33	3.00e-55	209.00
IUUC-Pop-098862	Populus trichocarpa	45.15	0.00e+00	713.00
IUUC-Ppe-101295	Prunus persica	46.38	0.00e+00	669.00
IUUC-Smo-109481	Selaginella moellendorffii	28.33	4.00e-61	229.00
IUUC-Sit-110599	Setaria italica	35.10	3.00e-123	435.00
IUUC-Sly-111867	Solanum lycopersicum	94.93	0.00e+00	700.00
IUUC-Sbi-114828	Sorghum bicolor	33.87	3.00e-127	448.00
IUUC-Tca-121601	Theobroma cacao	45.93	0.00e+00	683.00
IUUC-Tae-125330	Triticum aestivum	35.88	9.00e-123	433.00
IUUC-Tur-126303	Triticum urartu	38.75	6.00e-115	406.00
IUUC-Vvi-130947	Vitis vinifera	47.68	0.00e+00	762.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence