iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-018024

Ensembl Protein ID

Bra018091.1-P

UniProt Accession

M4DNK4; M4DNK4_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra018091	Bra018091.1	Bra018091.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.80e-07	30.5	237	278

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCle+f   ++++ lpC H fh +C+ +w       + + +CP Cr
   Q: 237  CLICLEEFqiGHEVRGLPCAHNFHVECIDQW------LRLNVKCPRCR 278
           ********88555******************......**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MAMRGVDFKW YDGFFLSMLA TSVIIVAINW KRYSSCDYPL HIWIVVDYTT VFIFRVFMFV 60
DNGLAAGLGL DFGSQQRNIG FWGRVVVLSV LSLLLYPFLW AWTVIGTIWF TRAKSCLPED 120

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Nucleotide Sequence
(Fasta)

ATGGCGATGA GAGGTGTCGA TTTCAAGTGG TGAGCTATCT TCAATCTTTC ATTAGGGTCC 60
AATATAAAGG ACACGACTTT CGATTCCGTG GGTATCTGAT TTGTGTGTGT AACGTTGCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000667	Aegilops tauschii	76.16	2.00e-131	462.00
IUUC-Atr-002648	Amborella trichopoda	70.17	6.00e-137	479.00
IUUC-Aly-006490	Arabidopsis lyrata	85.79	3.00e-175	607.00
IUUC-Ath-007655	Arabidopsis thaliana	84.97	1.00e-173	601.00
IUUC-Bdi-014759	Brachypodium distachyon	67.62	5.00e-122	430.00
IUUC-Bol-015730	Brassica oleracea	93.13	0.00e+00	660.00
IUUC-Gma-042879	Glycine max	72.78	8.00e-148	516.00
IUUC-Hvu-047589	Hordeum vulgare	79.59	1.00e-62	231.00
IUUC-Mtr-058746	Medicago truncatula	71.70	4.00e-150	523.00
IUUC-Mac-064833	Musa acuminata	75.29	7.00e-147	513.00
IUUC-Oba-075099	Oryza barthii	75.00	1.00e-134	472.00
IUUC-Obr-076541	Oryza brachyantha	72.49	3.00e-134	471.00
IUUC-Ogl-077544	Oryza glaberrima	75.00	1.00e-134	472.00
IUUC-Ogu-078123	Oryza glumaepatula	72.70	2.00e-127	447.00
IUUC-Oin-079313	Oryza indica	73.91	5.00e-128	450.00
IUUC-Ome-081106	Oryza meridionalis	63.75	8.00e-102	363.00
IUUC-Oni-082730	Oryza nivara	74.12	7.00e-137	479.00
IUUC-Opu-083224	Oryza punctata	74.92	1.00e-134	472.00
IUUC-Osa-085392	Oryza sativa	75.54	4.00e-133	467.00
IUUC-Ppa-095217	Physcomitrella patens	45.28	6.00e-68	250.00
IUUC-Pop-100029	Populus trichocarpa	69.29	1.00e-142	499.00
IUUC-Smo-109501	Selaginella moellendorffii	60.40	5.00e-102	363.00
IUUC-Sit-109685	Setaria italica	70.91	2.00e-135	475.00
IUUC-Sly-111730	Solanum lycopersicum	73.28	2.00e-145	508.00
IUUC-Stu-112821	Solanum tuberosum	72.65	6.00e-144	503.00
IUUC-Sbi-114646	Sorghum bicolor	70.08	6.00e-134	469.00
IUUC-Tca-121643	Theobroma cacao	72.30	7.00e-148	516.00
IUUC-Tae-124899	Triticum aestivum	70.55	3.00e-132	464.00
IUUC-Tur-126639	Triticum urartu	74.12	7.00e-105	374.00
IUUC-Vvi-131627	Vitis vinifera	64.71	6.00e-138	483.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence